RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.3□□□□□ -1.24
FN1-225ENST00000494446 RNF38Q9H0F5 515 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 CD248Q9HCU0 757 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 GJB4Q9NTQ9 266 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 ANKRD6Q9Y2G4 727 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 PCDHB6Q9Y5E3 794 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.3□□□□□ -1.24
FN1-225ENST00000494446 CPQQ9Y646 472 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 SLCO1B1Q9Y6L6 691 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 LRBAP50851 2863 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 KIF26BQ2KJY2 2108 aa7.3□□□□□ -1.24
FN1-225ENST00000494446 DOCK9Q9BZ29 2069 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 ANO9A1A5B4 782 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 KCNJ18B7U540 433 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 WASH3PC4AMC7 463 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 PIRO00625 290 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 NEMFO60524 1076 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 GLDCP23378 1020 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 PAX3P23760 479 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 ANO4Q32M45 955 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 SPATA1Q5VX52 437 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 JADE1Q6IE81 842 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 BLOC1S2Q6QNY1 142 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 LAYNQ6UX15 382 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 FAM124AQ86V42 546 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 GATAD2AQ86YP4 633 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 DHX40Q8IX18 779 aaKnown RBP7.29□□□□□ -1.24
FN1-225ENST00000494446 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 SCFD1Q8WVM8 642 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 KCNE4Q8WWG9 221 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 IGSF8Q969P0 613 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 HAPLN2Q9GZV7 340 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 BHMT2Q9H2M3 363 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 ITM2CQ9NQX7 267 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 TRPM5Q9NZQ8 1165 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 ARHGAP28Q9P2N2 729 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 RELNP78509 3460 aa7.29□□□□□ -1.24
FN1-225ENST00000494446 SFI1A8K8P3 1242 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 XBP1P17861 261 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ACAT1P24752 427 aaKnown RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 RPA1P27694 616 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 OXTRP30559 389 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 GRIK1P39086 918 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ACADVLP49748 655 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 TAF6P49848 677 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 TPMTP51580 245 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 SLC7A9P82251 487 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 MCL1Q07820 350 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 NR5A1Q13285 461 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 PDIA5Q14554 519 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ENOX2Q16206 610 aaKnown RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 FUT11Q495W5 492 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 GRAMD4Q6IC98 578 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 KDM7AQ6ZMT4 941 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ADAT2Q7Z6V5 191 aaKnown RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 EID2Q8N6I1 236 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 KIAA1958Q8N8K9 716 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ERMNQ8TAM6 284 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 BICD1Q96G01 975 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ZNF578Q96N58 590 aaPredicted RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 GABRG3Q99928 467 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 NUP58Q9BVL2 599 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 TM9SF3Q9HD45 589 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 ABCB6Q9NP58 842 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 DNAJC17Q9NVM6 304 aaKnown RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 USP36Q9P275 1121 aaKnown RBP7.28□□□□□ -1.24
FN1-225ENST00000494446 TBC1D14Q9P2M4 693 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 SEPT3Q9UH03 358 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 GTF3C4Q9UKN8 822 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 CLCA2Q9UQC9 943 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 FBN2P35556 2912 aa7.28□□□□□ -1.24
FN1-225ENST00000494446 PRRT4C9JH25 899 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 LAD1O00515 517 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 WNT7AO00755 349 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 HOXC11O43248 304 aaPredicted RBP7.27□□□□□ -1.25
FN1-225ENST00000494446 DTNBO60941 627 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 HIP1RO75146 1068 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 AFPP02771 609 aaKnown RBP7.27□□□□□ -1.25
FN1-225ENST00000494446 ITGAVP06756 1048 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 MBL2P11226 248 aaPredicted RBP7.27□□□□□ -1.25
FN1-225ENST00000494446 ACADMP11310 421 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 PFKLP17858 780 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 CR2P20023 1033 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 ABCB4P21439 1286 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 RPS6KB1P23443 525 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 CTSKP43235 329 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 CCR10P46092 362 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 STK3Q13188 491 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 SERINC3Q13530 473 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 STARD3Q14849 445 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 TMEM132DQ14C87 1099 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 CCDC142Q17RM4 750 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 KCNT1Q5JUK3 1230 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
FN1-225ENST00000494446 CPLX2Q6PUV4 134 aaKnown RBP7.27□□□□□ -1.25
FN1-225ENST00000494446 ZPBP2Q6X784 338 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms