RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 USP15Q9Y4E8 981 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 SPEF1Q9Y4P9 236 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 PCDHB7Q9Y5E2 793 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 UBIAD1Q9Y5Z9 338 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 LAMA4Q16363 1823 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SPTBN4Q9H254 2564 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 FRMPD4Q14CM0 1322 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 CCDC194A0A1B0GVG4 234 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 TBKBP1A7MCY6 615 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 LOC730098B7Z3J9 87 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 M0QZ92 97 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 N4BP3O15049 544 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 MAFGO15525 162 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 PRC1O43663 620 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 MGEA5O60502 916 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 GLP2RO95838 553 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 STAG3L1P0CL83 205 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 ARP10275 920 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SCG2P13521 617 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 GSPT1P15170 499 aaKnown RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 KLRC1P26715 233 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 AOAHP28039 575 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 KIF5BP33176 963 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 LSP1P33241 339 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 STAT5BP51692 787 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 TCF15Q12870 199 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 COASYQ13057 564 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 KLF1Q13351 362 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 LRRC32Q14392 662 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 PLCB4Q15147 1175 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 EPHA7Q15375 998 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 CATSPEREQ5SY80 951 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 TTC22Q5TAA0 569 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 CD276Q5ZPR3 534 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 ESRP1Q6NXG1 681 aaKnown RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 MTHFD1LQ6UB35 978 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 MB21D2Q8IYB1 491 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 CMTR2Q8IYT2 770 aaKnown RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SMRP1Q8NCR6 262 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 PPP2R3CQ969Q6 453 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 E2F7Q96AV8 911 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 AHCYL2Q96HN2 611 aaKnown RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 CDHR1Q96JP9 859 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 PGBD1Q96JS3 809 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 ADAM2Q99965 735 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SGPP1Q9BX95 441 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SPZ1Q9BXG8 430 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 FTHL17Q9BXU8 183 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 LRRC2Q9BYS8 371 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SLC13A1Q9BZW2 595 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 AZI2Q9H6S1 392 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 LY9Q9HBG7 655 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 JADE2Q9NQC1 790 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 C14orf119Q9NWQ9 140 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 ARHGAP28Q9P2N2 729 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 SLC9A2Q9UBY0 812 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 CNOT6Q9ULM6 557 aaKnown RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 NOC2LQ9Y3T9 749 aaKnown RBP5.83□□□□□ -1.48
PTCD3-219ENST00000494323 ASB1Q9Y576 335 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 TRPV2Q9Y5S1 764 aa5.83□□□□□ -1.48
PTCD3-219ENST00000494323 IGSF9BQ9UPX0 1349 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 E2F8A0AVK6 867 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 DENND3A2RUS2 1198 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 CCDC69A6NI79 296 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 H0Y858 1186 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 DDX39AO00148 427 aaKnown RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 RPS6KA5O75582 802 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 FGF18O76093 207 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 MT-CO1P00395 513 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 PDGFBP01127 241 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 C8BP07358 591 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 MMEP08473 750 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ENO2P09104 434 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 IGFBP6P24592 240 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 CD40P25942 277 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 SMARCA1P28370 1054 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 AVPR2P30518 371 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 GNAQP50148 359 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 VCPP55072 806 aaKnown RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ACTR2P61160 394 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ADCY1Q08828 1119 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 VASNQ6EMK4 673 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 SWSAP1Q6NVH7 229 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 CASC1Q6TDU7 716 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 PLPPR4Q7Z2D5 763 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 HEATR3Q7Z4Q2 680 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 BMP8AQ7Z5Y6 402 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 IGDCC3Q8IVU1 814 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 SUGP1Q8IWZ8 645 aaKnown RBP5.82□□□□□ -1.48
PTCD3-219ENST00000494323 CMIPQ8IY22 773 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 THNSL1Q8IYQ7 743 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 KIAA0319LQ8IZA0 1049 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 NME8Q8N427 588 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 FAM26EQ8N5C1 309 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 ZNF610Q8N9Z0 462 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 FANCBQ8NB91 859 aa5.82□□□□□ -1.48
PTCD3-219ENST00000494323 VN1R2Q8NFZ6 395 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms