RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 WASHC5Q12768 1159 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 MTMR1Q13613 665 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 KIF22Q14807 665 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 ZNF585BQ52M93 769 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 TAF2Q6P1X5 1199 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 LVRNQ6Q4G3 990 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 C16orf54Q6UWD8 224 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 LAYNQ6UX15 382 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 PARS2Q7L3T8 475 aaKnown RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 MAATS1Q7Z4T9 603 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 PIP4P1Q86T03 277 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 SPATS2Q86XZ4 545 aaKnown RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 HSCBQ8IWL3 235 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 PSD4Q8NDX1 1056 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 DDX17Q92841 729 aaKnown RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 GJA10Q969M2 543 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 CCDC47Q96A33 483 aaKnown RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 RITA1Q96K30 269 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 FSD1LQ9BXM9 530 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 SERHLQ9NQF3 203 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 DUSP22Q9NRW4 184 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 RASSF1Q9NS23 344 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 TFCP2L1Q9NZI6 479 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 DGKBQ9Y6T7 804 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 MORC2Q9Y6X9 1032 aaPredicted RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 PHLDB1Q86UU1 1377 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 A0A087WYN8 130 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TRIM75PA6NK02 468 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 ZNF785A8K8V0 405 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 hCG_1984214I3L0E3 225 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 K7ENM7 598 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 K7ESF4 209 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 PPM1DO15297 605 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 PRPF3O43395 683 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 SNX2O60749 519 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 NBNO60934 754 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TJP3O95049 919 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 ARIH2O95376 493 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TOMM40O96008 361 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 GNAI2P04899 355 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 IL6RP08887 468 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 MALP21145 153 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 PSMA3P25788 255 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 SERPINB3P29508 390 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 DEKP35659 375 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 RXRGP48443 463 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 RENBPP51606 427 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 ZNF135P52742 658 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 CYP4F2P78329 520 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 CHAF1AQ13111 956 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 STK3Q13188 491 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 IL10RAQ13651 578 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 SAFBQ15424 915 aaKnown RBP eCLIP2.56□□□□□ -2
PTPN12-212ENST00000494248 ELF2Q15723 593 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 CERKLQ49MI3 558 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 MINDY4Q4G0A6 757 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 AMOTQ4VCS5 1084 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 KHDC1Q4VXA5 237 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 SPECC1Q5M775 1068 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TREML2Q5T2D2 321 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 ARMC3Q5W041 872 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 C1orf228Q6PIY5 440 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TRIM72Q6ZMU5 477 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 RSRC2Q7L4I2 434 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 LCA5Q86VQ0 697 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 OR8H2Q8N162 312 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 PELI3Q8N2H9 469 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 LRRC71Q8N4P6 559 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 IL17REQ8NFR9 667 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 JPH3Q8WXH2 748 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 TTC17Q96AE7 1141 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 MTMR8Q96EF0 704 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 SMAD5Q99717 465 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 VRK1Q99986 396 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 RHOBTB2Q9BYZ6 727 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TINAGL1Q9GZM7 467 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 PUS7LQ9H0K6 701 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 FOXP1Q9H334 677 aaPredicted RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 SMOC2Q9H3U7 446 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 GPR35Q9HC97 309 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 SLC5A4Q9NY91 659 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 POLHQ9Y253 713 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 TTLL3Q9Y4R7 772 aa2.56□□□□□ -2
PTPN12-212ENST00000494248 CFAP20Q9Y6A4 193 aaKnown RBP2.56□□□□□ -2
PTPN12-212ENST00000494248 CCDC154A6NI56 674 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 POC1B-GALNT4F8VUJ3 575 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 UBE2Q2LH0YL09 131 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 F2RL2O00254 374 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 HTRA2O43464 458 aaPredicted RBP2.55□□□□□ -2
PTPN12-212ENST00000494248 USP1O94782 785 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 CHRM5P08912 532 aaPredicted RBP2.55□□□□□ -2
PTPN12-212ENST00000494248 DLDP09622 509 aaKnown RBP2.55□□□□□ -2
PTPN12-212ENST00000494248 NPSP0C0P6 89 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 FTH1P19P0C7X4 201 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 SETSIPP0DME0 302 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 ENGP17813 658 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 TNFAIP3P21580 790 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 IL1R2P27930 398 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 PIK3CAP42336 1068 aa2.55□□□□□ -2
PTPN12-212ENST00000494248 GCLCP48506 637 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms