RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CREB1P16220 341 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 TPSB2P20231 275 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 ARFIP2P53365 341 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 SH3BGRP55822 239 aaPredicted RBP11.96□□□□□ -0.49
RFC4-214ENST00000494047 SOX10P56693 466 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 SP4Q02446 784 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 PDE4CQ08493 712 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 PTK7Q13308 1070 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 DPYSL3Q14195 570 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 TPSAB1Q15661 275 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 PTPN20Q4JDL3 420 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 DNAL1Q4LDG9 190 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 TRMT1LQ7Z2T5 733 aaKnown RBP11.96□□□□□ -0.49
RFC4-214ENST00000494047 LRRC6Q86X45 466 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 XYLT1Q86Y38 959 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 PSTKQ8IV42 348 aaKnown RBP11.96□□□□□ -0.49
RFC4-214ENST00000494047 GPATCH11Q8N954 259 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 RNF149Q8NC42 400 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 SPATA18Q8TC71 538 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 ACMSDQ8TDX5 336 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 ATP2A3Q93084 1043 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 WWP1Q9H0M0 922 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 RCOR3Q9P2K3 495 aaPredicted RBP11.96□□□□□ -0.49
RFC4-214ENST00000494047 RBPJLQ9UBG7 517 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 DNAJB4Q9UDY4 337 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 BARX2Q9UMQ3 279 aaPredicted RBP11.96□□□□□ -0.49
RFC4-214ENST00000494047 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.96□□□□□ -0.49
RFC4-214ENST00000494047 STK38LQ9Y2H1 464 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.96□□□□□ -0.49
RFC4-214ENST00000494047 RALGAPA2Q2PPJ7 1873 aa11.96□□□□□ -0.49
RFC4-214ENST00000494047 HACD1B0YJ81 288 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 COPEO14579 308 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 APOL1O14791 398 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 TRUB2O95900 331 aaKnown RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 MYL4P12829 197 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 MLNP12872 115 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 RFC1P35251 1148 aaPredicted RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 FLT3LGP49771 235 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 BASP1P80723 227 aaKnown RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 PRKCZQ05513 592 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 KCNJ11Q14654 390 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 UBAP2Q5T6F2 1119 aaKnown RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 DARS2Q6PI48 645 aaKnown RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 CLNKQ7Z7G1 428 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 SESTD1Q86VW0 696 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 C4orf33Q8N1A6 199 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 PPFIBP2Q8ND30 876 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 MZB1Q8WU39 189 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 DCAKDQ8WVC6 231 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 SOCS4Q8WXH5 440 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 ZBTB45Q96K62 511 aaPredicted RBP11.95□□□□□ -0.5
RFC4-214ENST00000494047 BTBD10Q9BSF8 475 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
RFC4-214ENST00000494047 F8W8V4 182 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 SPAG7O75391 227 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 ZBED1O96006 694 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 HARSP12081 509 aaKnown RBP11.94□□□□□ -0.5
RFC4-214ENST00000494047 PRKCHP24723 683 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 CCNFP41002 786 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 NEK3P51956 506 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 RAD23BP54727 409 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 GPX6P59796 221 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 ZBTB16Q05516 673 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 MGAT5Q09328 741 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 KRT81Q14533 505 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 NAA25Q14CX7 972 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 DCAF4L1Q3SXM0 396 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 FAM102AQ5T9C2 384 aaPredicted RBP11.94□□□□□ -0.5
RFC4-214ENST00000494047 LCLAT1Q6UWP7 414 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.94□□□□□ -0.5
RFC4-214ENST00000494047 TCP10LQ8TDR4 215 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 SREK1Q8WXA9 508 aaKnown RBP11.94□□□□□ -0.5
RFC4-214ENST00000494047 CDKL2Q92772 493 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 STMN2Q93045 179 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 STAMBPL1Q96FJ0 436 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 NSL1Q96IY1 281 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
RFC4-214ENST00000494047 VCXQ9H320 206 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 MLXIPLQ9NP71 852 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 METTL5Q9NRN9 209 aaKnown RBP11.94□□□□□ -0.5
RFC4-214ENST00000494047 ERAP1Q9NZ08 941 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 LRRC42Q9Y546 428 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 TEX264Q9Y6I9 313 aa11.94□□□□□ -0.5
RFC4-214ENST00000494047 SF3B1O75533 1304 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■■ 37.9
RFC4-214ENST00000494047 ASB14A6NK59 587 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 M0QYV0 167 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 MAGEC1O60732 1142 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 CSDE1O75534 798 aaKnown RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 SLC34A2O95436 690 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 CST3P01034 146 aaPredicted RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 SKIP12755 728 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms