RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 WEE1P30291 646 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 CLCN1P35523 988 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 AVPR1AP37288 418 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 ADIGQ0VDE8 80 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 USP4Q13107 963 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 DRAP1Q14919 205 aaPredicted RBP12.28□□□□□ -0.44
UBA3-211ENST00000493957 ZNF77Q15935 545 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 CNGA2Q16280 664 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 RAB41Q5JT25 222 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 TMEM31Q5JXX7 168 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 PMF1Q6P1K2 205 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 BHLHA9Q7RTU4 235 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 MFSD6LQ8IWD5 586 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 SIX5Q8N196 739 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 WBP2Q969T9 261 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 TRMT61BQ9BVS5 477 aaKnown RBP12.28□□□□□ -0.44
UBA3-211ENST00000493957 ULBP1Q9BZM6 244 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 PNPLA8Q9NP80 782 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 HEBP1Q9NRV9 189 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 FAM207AQ9NSI2 230 aaPredicted RBP12.28□□□□□ -0.44
UBA3-211ENST00000493957 TDP1Q9NUW8 608 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 EHD2Q9NZN4 543 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 HESX1Q9UBX0 185 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 CYTH4Q9UIA0 394 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 SCML2Q9UQR0 700 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 USP3Q9Y6I4 520 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 CACNA1IQ9P0X4 2223 aa12.27□□□□□ -0.44
UBA3-211ENST00000493957 SHISA7A6NL88 538 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 SMTNL1A8MU46 457 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 STK25O00506 426 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 TBX18O95935 607 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 GNA15P30679 374 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 PLA2G4AP47712 749 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 TKTL1P51854 596 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 UBXN1Q04323 297 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 TNK2Q07912 1038 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 FCHO2Q0JRZ9 810 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 FKBP15Q5T1M5 1219 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 CWF19L1Q69YN2 538 aaKnown RBP12.27□□□□□ -0.45
UBA3-211ENST00000493957 TRIM68Q6AZZ1 485 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 PASD1Q8IV76 773 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 CELF5Q8N6W0 485 aaKnown RBP12.27□□□□□ -0.45
UBA3-211ENST00000493957 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 BPIFB1Q8TDL5 484 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 SH3RF2Q8TEC5 729 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 CLEC4CQ8WTT0 213 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 ZNF606Q8WXB4 792 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 OVCA2Q8WZ82 227 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
UBA3-211ENST00000493957 C1QTNF1Q9BXJ1 281 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 FBXO44Q9H4M3 255 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 BRD9Q9H8M2 597 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 NLRC4Q9NPP4 1024 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 ARHGEF3Q9NR81 526 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 COMMD8Q9NX08 183 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 TJP2Q9UDY2 1190 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 KIAA1257Q9ULG3 409 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 CPQQ9Y646 472 aa12.27□□□□□ -0.45
UBA3-211ENST00000493957 MYO18AQ92614 2054 aaKnown RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 F8VZ95 297 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 LEFTY2O00292 366 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 ZNF263O14978 683 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 TPM2P07951 284 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 SETSIPP0DME0 302 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 MBL2P11226 248 aaPredicted RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 LCP1P13796 627 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 ARSAP15289 507 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 CD72P21854 359 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 GPD2P43304 727 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 SOX9P48436 509 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 PPP3CCP48454 512 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 VCPP55072 806 aaKnown RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 POLR2FP61218 127 aaKnown RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 MTF1Q14872 753 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 HECTD3Q5T447 861 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 SNX30Q5VWJ9 437 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 YAF2Q8IY57 180 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 FAM71AQ8IYT1 594 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 ANKRD20A12PQ8NF67 263 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 SLC35F5Q8WV83 523 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 FAM81BQ96LP2 452 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 ERGIC2Q96RQ1 377 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 UBXN6Q9BZV1 441 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 HPS4Q9NQG7 708 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
UBA3-211ENST00000493957 GKN1Q9NS71 199 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 WNT16Q9UBV4 365 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
UBA3-211ENST00000493957 NAGPAQ9UK23 515 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms