RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 DPY19L2P1Q6NXN4 242 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 MIS18BP1Q6P0N0 1132 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 NIPA1Q7RTP0 329 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF571Q7Z3V5 609 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 MRPL10Q7Z7H8 261 aaKnown RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 LONP2Q86WA8 852 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 SCFD1Q8WVM8 642 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 LOXL4Q96JB6 756 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF317Q96PQ6 595 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 KXD1Q9BQD3 176 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 KCNMB3Q9NPA1 279 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 PCYOX1Q9UHG3 505 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 NOVA2Q9UNW9 492 aaKnown RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 MYH11P35749 1972 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 CNTNAP2Q9UHC6 1331 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SLC37A4O43826 429 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF862O60290 1169 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 MARCH6O60337 910 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 PHF2O75151 1096 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 MTA2O94776 668 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 FOSP01100 380 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 PON1P27169 355 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 HOXA6P31267 233 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 CXCL12P48061 93 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 MAGOHP61326 146 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 NTHL1P78549 312 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 DR1Q01658 176 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 MAPK7Q13164 816 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SOWAHCQ53LP3 525 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 TTC19Q6DKK2 380 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SYDE1Q6ZW31 735 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 TRMT10CQ7L0Y3 403 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 GPBP1Q86WP2 473 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 COLGALT2Q8IYK4 626 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 UBL4BQ8N7F7 174 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 GPATCH11Q8N954 259 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 MAIP1Q8WWC4 291 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 CTNNBL1Q8WYA6 563 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SLCO2A1Q92959 643 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 MAGOHBQ96A72 148 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 GRAMD1AQ96CP6 724 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM167AQ96KS9 214 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM20AQ96MK3 541 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 SH2D3AQ9BRG2 576 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 STK33Q9BYT3 514 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 GCOM2Q9BZD3 368 aaPredicted RBP11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 EBF2Q9HAK2 575 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 ZDHHC18Q9NUE0 388 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 FBXW11Q9UKB1 542 aa11.17□□□□□ -0.62
PDLIM1-205ENST00000493949 NUP205Q92621 2012 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 IGLV3-22A0A075B6J6 115 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 TMEM150BA6NC51 233 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 ANKRD62A6NC57 917 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 CHURC1-FNTBB4DL54 471 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 K7ESF4 209 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 P4HA2O15460 535 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 KALRNO60229 2985 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 LUC7L3O95232 432 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 TDP2O95551 362 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 RPA1P27694 616 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 SOX5P35711 763 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF76P36508 570 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 FNTBP49356 437 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 PMS2P54278 862 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 SATB1Q01826 763 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 CREMQ03060 361 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 CAV1Q03135 178 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 DSC1Q08554 894 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 CCDC15Q0P6D6 951 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 SRSF5Q13243 272 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 GAS6Q14393 721 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 CYP1B1Q16678 543 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 UGCGQ16739 394 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 SPDYAQ5MJ70 313 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF746Q6NUN9 644 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 SPEM1Q8N4L4 309 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 CCDC63Q8NA47 563 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 ITFG1Q8TB96 612 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 ZCCHC14Q8WYQ9 949 aaKnown RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 GJA10Q969M2 543 aa11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 INO80BQ9C086 356 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1-205ENST00000493949 RSAD1Q9HA92 442 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms