RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CHD8Q9HCK8 2581 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 RALGAPA1Q6GYQ0 2036 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CTAGE9A4FU28 777 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 GOLGA6CA6NDK9 693 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 SPECC1L-ADORA2AF8WAN1 911 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 GABRDO14764 452 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 POLR2DO15514 142 aaKnown RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 AHCYL1O43865 530 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 KLRC4O43908 158 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 COQ9O75208 318 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 YEATS4O95619 227 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 KRT19P08727 400 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 PDGFRBP09619 1106 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 GOLGA6DP0CG33 693 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 TGM1P22735 817 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 PAX7P23759 505 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CTHP32929 405 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ABCD1P33897 745 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 AFMP43652 599 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 TUFMP49411 452 aaKnown RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CASP4P49662 377 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CYP2J2P51589 502 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 IRAK1P51617 712 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CACNA2D1P54289 1103 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 USP46P62068 366 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 FANCCQ00597 558 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ACTN3Q08043 901 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 MTA1Q13330 715 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 STIM1Q13586 685 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 PON2Q15165 354 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 LPAL2Q16609 132 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF528Q3MIS6 628 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC40Q4G0X9 1142 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ZC3H12AQ5D1E8 599 aaKnown RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 FAM26FQ5R3K3 315 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 RESP18Q5W5W9 173 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CNNM4Q6P4Q7 775 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 NT5DC4Q86YG4 428 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 VSTM4Q8IW00 320 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC65Q8IXS2 484 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC170Q8IYT3 715 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ADGRF2Q8IZF7 708 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CMTM8Q8IZV2 173 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 THEM5Q8N1Q8 247 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 LRRC52Q8N7C0 313 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF507Q8TCN5 953 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 SPPL2BQ8TCT7 592 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 BCAS4Q8TDM0 211 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC47Q96A33 483 aaKnown RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF560Q96MR9 790 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 HS3ST6Q96QI5 342 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 SLC39A2Q9NP94 309 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 PARD6AQ9NPB6 346 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 AGPAT3Q9NRZ7 376 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 GKN1Q9NS71 199 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 GOLGA6AQ9NYA3 693 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 HSFX1Q9UBD0 423 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 SERTAD1Q9UHV2 236 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 ITGA11Q9UKX5 1188 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 DSEQ9UL01 958 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 MAGED2Q9UNF1 606 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-234ENST00000493923 PCDHB5Q9Y5E4 795 aa8.65□□□□□ -1.02
HDAC6-234ENST00000493923 EPG5Q9HCE0 2579 aa8.65□□□□□ -1.03
HDAC6-234ENST00000493923 HELZP42694 1942 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 KIAA1549LQ6ZVL6 1849 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 C2orf78A6NCI8 922 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 CHURC1-FNTBB4DL54 471 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 K7ESF4 209 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 MAN2B1O00754 1011 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ACTN4O43707 911 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 HUS1O60921 280 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 NOL4O94818 638 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 LUC7L3O95232 432 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 LDHAP00338 332 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 TMEM191BP0C7N4 346 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 EPB41P11171 864 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 PAX3P23760 479 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 WEE1P30291 646 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 MAGEA8P43361 318 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 FNTBP49356 437 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 RPS6KA3P51812 740 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 KPNA1P52294 538 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 RBP5P82980 135 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ZXDBP98169 803 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 TSPY1Q01534 308 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 CYP24A1Q07973 514 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ALCAMQ13740 583 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 FAM171BQ6P995 826 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 TRAPPC11Q7Z392 1133 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ITIH5Q86UX2 942 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 MFN1Q8IWA4 741 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 SCN4BQ8IWT1 228 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 YAF2Q8IY57 180 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 DCP1BQ8IZD4 617 aaKnown RBP8.64□□□□□ -1.03
HDAC6-234ENST00000493923 ABCA7Q8IZY2 2146 aa8.64□□□□□ -1.03
HDAC6-234ENST00000493923 DRAXINQ8NBI3 349 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms