RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 GPRIN1Q7Z2K8 1008 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 TTC8Q8TAM2 541 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 UBA3Q8TBC4 463 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 CSGALNACT1Q8TDX6 532 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 IRF7Q92985 503 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 USP13Q92995 863 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 RSPRY1Q96DX4 576 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 ZFYVE19Q96K21 471 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 KREMEN1Q96MU8 473 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 FBXO44Q9H4M3 255 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 KIF9Q9HAQ2 790 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 CSNK1G1Q9HCP0 422 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 LTB4R2Q9NPC1 389 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 TSPAN16Q9UKR8 245 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 CCL26Q9Y258 94 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 NCANO14594 1321 aa10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 NUP210Q8TEM1 1887 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC12-222ENST00000493792 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 GTPBP10A4D1E9 387 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 SMTNL1A8MU46 457 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 M0QYV0 167 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 RNF225M0QZC1 329 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 SLC30A4O14863 429 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 MBL2P11226 248 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TDGF1P13385 188 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TARSP26639 723 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 PDE4CQ08493 712 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 BST2Q10589 180 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 RAPGEF1Q13905 1077 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 UBXN2BQ14CS0 331 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 KRT31Q15323 416 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 ARHGAP29Q52LW3 1261 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 CDKAL1Q5VV42 579 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 ENOSF1Q7L5Y1 443 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TTC30AQ86WT1 665 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 UBR7Q8N806 425 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 ANKRD52Q8NB46 1076 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 SH3RF2Q8TEC5 729 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TFAP2BQ92481 460 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 FAM81BQ96LP2 452 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 SLC22A12Q96S37 553 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 NELL2Q99435 816 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 LSM14BQ9BX40 385 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 LRRC4Q9HBW1 653 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 PNPLA8Q9NP80 782 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 PRMT8Q9NR22 394 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 TLR8Q9NR97 1041 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 HEBP1Q9NRV9 189 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 GKN1Q9NS71 199 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 COMMD8Q9NX08 183 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 OBP2AQ9NY56 170 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 DNAJC12Q9UKB3 198 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 KIAA1257Q9ULG3 409 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 USP18Q9UMW8 372 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 COL4A3Q01955 1670 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 MYO16Q9Y6X6 1858 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 ATRXP46100 2492 aa10.97□□□□□ -0.65
TRAPPC12-222ENST00000493792 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 BECN2A8MW95 431 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 HHLA1C9JL84 531 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 O00370 1275 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 CHADO15335 359 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 CYP26A1O43174 497 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 THAP12O43422 761 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 WEE1P30291 646 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 MAGEA9P43362 315 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 RPS9P46781 194 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 IFNAR2P48551 515 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 PPM1JQ5JR12 505 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 HECTD3Q5T447 861 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 MAMSTRQ6ZN01 415 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 PIGZQ86VD9 579 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 SIX6OS1Q8N1H7 587 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 OVCA2Q8WZ82 227 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 DNASE1L2Q92874 299 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 SECISBP2LQ93073 1101 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 LRRC3BQ96PB8 259 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 CCSER2Q9H7U1 834 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 SCML2Q9UQR0 700 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 CPQQ9Y646 472 aa10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-222ENST00000493792 ANAPC1Q9H1A4 1944 aa10.96□□□□□ -0.66
TRAPPC12-222ENST00000493792 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 LEFTY2O00292 366 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TULP2O00295 520 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 PIK3R2O00459 728 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 SCAMP3O14828 347 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 XPO1O14980 1071 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 COCHO43405 550 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 MED7O43513 233 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TLR5O60602 858 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 OAS1P00973 400 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms