RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 ZNF516Q92618 1163 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 OTUB2Q96DC9 234 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 GTPBP2Q9BX10 602 aaKnown RBP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 LRRC27Q9C0I9 530 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 DEC1Q9P2X7 70 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ZFYVE26Q68DK2 2539 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 BAHCC1Q9P281 2608 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 HOXC11O43248 304 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 PHACTR2O75167 634 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 CLSTN1O94985 981 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 STAU1O95793 577 aaKnown RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 HOXB2P14652 356 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 GABRG2P18507 467 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SLC5A3P53794 718 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 ATXN3P54252 364 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 CDH8P55286 799 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SIM1P81133 766 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 E2F4Q16254 413 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 DUOXA1Q1HG43 343 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 PREPLQ4J6C6 727 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 PIP4P1Q86T03 277 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 XXYLT1Q8NBI6 393 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 WBP2Q969T9 261 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SYAP1Q96A49 352 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 DHX58Q96C10 678 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 ERLEC1Q96DZ1 483 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SMYD3Q9H7B4 428 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SPHK2Q9NRA0 654 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 KBTBD4Q9NVX7 518 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 GMIPQ9P107 970 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 SLC6A14Q9UN76 642 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 NEUROG3Q9Y4Z2 214 aa13.08□□□□□ -0.32
SAMM50-205ENST00000493621 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
SAMM50-205ENST00000493621 ATRXP46100 2492 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 PKD1L2Q7Z442 2459 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 SRRM3A6NNA2 597 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-205ENST00000493621 TRIM24O15164 1050 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 ATICP31939 592 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 HOXD12P35452 270 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 AMPD3Q01432 767 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-205ENST00000493621 STK38Q15208 465 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 SNX30Q5VWJ9 437 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 SLC36A4Q6YBV0 504 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 SCARA5Q6ZMJ2 495 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 PAQR9Q6ZVX9 377 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 MIB1Q86YT6 1006 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 HDDC3Q8N4P3 179 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 CEP76Q8TAP6 659 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 NACA2Q9H009 215 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 XYLT2Q9H1B5 865 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 DMAP1Q9NPF5 467 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-205ENST00000493621 KLK13Q9UKR3 277 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 HCN2Q9UL51 889 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
SAMM50-205ENST00000493621 WDFY3Q8IZQ1 3526 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 UPK3BL1B0FP48 263 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 UPK3BL2E5RIL1 263 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 OPHN1O60890 802 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 AP1G2O75843 785 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 SERPINF2P08697 491 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-205ENST00000493621 NTSR1P30989 418 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 NASPP49321 788 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-205ENST00000493621 CASP4P49662 377 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 TUBP50607 506 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 ZNF33AQ06730 810 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 BIRC3Q13489 604 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-205ENST00000493621 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 GRAMD4Q6IC98 578 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 MINDY1Q8N5J2 469 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 OR2I1PQ8NGU4 316 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 SMARCD1Q96GM5 515 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 CUEDC2Q9H467 287 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 KRT82Q9NSB4 513 aa13.06□□□□□ -0.32
SAMM50-205ENST00000493621 DNAJC17Q9NVM6 304 aaKnown RBP13.06□□□□□ -0.32
SAMM50-205ENST00000493621 IL37Q9NZH6 218 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms