RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 NLRC4Q9NPP4 1024 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
CLIP2-209ENST00000493166 ARHGEF3Q9NR81 526 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 NAGPAQ9UK23 515 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 CPQQ9Y646 472 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 MYOFQ9NZM1 2061 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 PRR33A8MZF0 331 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 PIK3R2O00459 728 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 EPHB6O15197 1021 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 CHADO15335 359 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 TEX33O43247 280 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 ZBED1O96006 694 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 RARGP13631 454 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 LCP1P13796 627 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 CLCN1P35523 988 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 PLCB2Q00722 1185 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 MTF1Q14872 753 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 ZNF77Q15935 545 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 PMF1Q6P1K2 205 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 HFE2Q6ZVN8 426 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 ARHGAP18Q8N392 663 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 CSGALNACT1Q8TDX6 532 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 PBXIP1Q96AQ6 731 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 ZFYVE19Q96K21 471 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 HSFY1Q96LI6 401 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 SPAG5Q96R06 1193 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 NMUR1Q9HB89 426 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 CNGB3Q9NQW8 809 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 ST7Q9NRC1 585 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 SMPD4Q9NXE4 827 aa13.44□□□□□ -0.26
CLIP2-209ENST00000493166 A0A1B0GTH6 734 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 KRBA1A5PL33 1030 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 LEFTY2O00292 366 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 PDGFBP01127 241 aaPredicted RBP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 RALAP11233 206 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 TCF3P15923 654 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 KRT9P35527 623 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 GPD2P43304 727 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 JAM2P57087 298 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 YWHAGP61981 247 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 FANCCQ00597 558 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 MLF2Q15773 248 aaPredicted RBP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 SLC44A4Q53GD3 710 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 BMP8AQ7Z5Y6 402 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 SCD5Q86SK9 330 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 PASD1Q8IV76 773 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 CDK5RAP1Q96SZ6 601 aaKnown RBP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 CYLDQ9NQC7 956 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLIP2-209ENST00000493166 OSER1Q9NX31 292 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 CLIC5Q9NZA1 410 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 CEP83Q9Y592 693 aa13.43□□□□□ -0.26
CLIP2-209ENST00000493166 ARNTLO00327 626 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 STK25O00506 426 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 GFPT2O94808 682 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 FBXO21O94952 628 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 TBX18O95935 607 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 CYP11B1P15538 503 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 SOX5P35711 763 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 ATP5C1P36542 298 aaKnown RBP13.42□□□□□ -0.26
CLIP2-209ENST00000493166 STAT1P42224 750 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 ACADSBP45954 432 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 IFNAR2P48551 515 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 ZXDBP98169 803 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 PRKCQQ04759 706 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 GOLGA8FQ08AF8 430 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 GOLGA8DPQ0D2H9 430 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 C10orf120Q5SQS8 335 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 IER5LQ5T953 404 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 TPRG1Q6ZUI0 275 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 RSRC2Q7L4I2 434 aaKnown RBP13.42□□□□□ -0.26
CLIP2-209ENST00000493166 BHLHA9Q7RTU4 235 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 SUGP1Q8IWZ8 645 aaKnown RBP13.42□□□□□ -0.26
CLIP2-209ENST00000493166 FLCNQ8NFG4 579 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 NDRG1Q92597 394 aaKnown RBP13.42□□□□□ -0.26
CLIP2-209ENST00000493166 SHDQ96IW2 340 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 LRFN3Q9BTN0 628 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 MIS12Q9H081 205 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 HEBP1Q9NRV9 189 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 GKN1Q9NS71 199 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 DUS2Q9NX74 493 aaKnown RBP13.42□□□□□ -0.26
CLIP2-209ENST00000493166 CFAP97Q9P2B7 532 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 RAPGEFL1Q9UHV5 662 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 NUDT5Q9UKK9 219 aa13.42□□□□□ -0.26
CLIP2-209ENST00000493166 KIAA1549LQ6ZVL6 1849 aa13.41□□□□□ -0.26
CLIP2-209ENST00000493166 GABBR2O75899 941 aa13.41□□□□□ -0.26
CLIP2-209ENST00000493166 IRF1P10914 325 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms