RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 K7EQS6 105 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 TLR5O60602 858 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 RETP07949 1114 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
LRTM1-202ENST00000493075 ATP5C1P36542 298 aaKnown RBP12.12□□□□□ -0.47
LRTM1-202ENST00000493075 ID4P47928 161 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 RAD23BP54727 409 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 FOXK2Q01167 660 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 GAD2Q05329 585 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 DCAF17Q5H9S7 520 aaPredicted RBP12.12□□□□□ -0.47
LRTM1-202ENST00000493075 TCERG1LQ5VWI1 586 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 NAIF1Q69YI7 327 aaPredicted RBP12.12□□□□□ -0.47
LRTM1-202ENST00000493075 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
LRTM1-202ENST00000493075 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 KIAA2013Q8IYS2 634 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 SLC4A11Q8NBS3 891 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 ACDQ96AP0 544 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 PNKPQ96T60 521 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 NACA2Q9H009 215 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
LRTM1-202ENST00000493075 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
LRTM1-202ENST00000493075 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TRIM49BA6NDI0 452 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 P4HA2O15460 535 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 LRP3O75074 770 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 SDHBP21912 280 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TGM1P22735 817 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 PGFP49763 221 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 YWHAEP62258 255 aaKnown RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 MRPS21P82921 87 aaKnown RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 CUL2Q13617 745 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 MORC3Q14149 939 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ZNF394Q53GI3 561 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TTI2Q6NXR4 508 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TADA2BQ86TJ2 420 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 RPLP0P6Q8NHW5 317 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 CDK5RAP1Q96SZ6 601 aaKnown RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 CLIC5Q9NZA1 410 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 EBF1Q9UH73 591 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 KIF26AQ9ULI4 1882 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GREM1O60565 184 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GNA14O95837 355 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TBX18O95935 607 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ADH5P11766 374 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 RARGP13631 454 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 BMP6P22004 513 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GRIA2P42262 883 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 TNFRSF4P43489 277 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 FMO5P49326 533 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 SLC8A3P57103 927 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 DMC1Q14565 340 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 HSF5Q4G112 596 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-202ENST00000493075 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 LY6G5CQ5SRR4 150 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 PRR23BQ6ZRT6 265 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ERMP1Q7Z2K6 904 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 SCD5Q86SK9 330 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ARHGAP18Q8N392 663 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 GAB3Q8WWW8 586 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 LOXL4Q96JB6 756 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 ARID3AQ99856 593 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 NMUR1Q9HB89 426 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 SPHK2Q9NRA0 654 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 OSER1Q9NX31 292 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 DNMT3LQ9UJW3 386 aa12.11□□□□□ -0.47
LRTM1-202ENST00000493075 DENND4CQ5VZ89 1909 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 FANCMQ8IYD8 2048 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 FAM186AA6NE01 2351 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 PTPRDP23468 1912 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 A0A1W2PQH9 124 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 AXIN1O15169 862 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 CYP26A1O43174 497 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 FOXD2O60548 495 aaPredicted RBP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 RPP40O75818 363 aaKnown RBP12.1□□□□□ -0.47
LRTM1-202ENST00000493075 KAT7O95251 611 aa12.1□□□□□ -0.47
LRTM1-202ENST00000493075 APBB3O95704 486 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms