RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 PNPLA8Q9NP80 782 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 E2F8A0AVK6 867 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 HRO43593 1189 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 ATG13O75143 517 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 IRF1P10914 325 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 HOXA6P31267 233 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 PPP1R2P41236 205 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 MORC3Q14149 939 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 TTI2Q6NXR4 508 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 RHBDF2Q6PJF5 856 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 TTC39CQ8N584 583 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 RPLP0P6Q8NHW5 317 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 NELFBQ8WX92 580 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 WBP2Q969T9 261 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 TMEM176AQ96HP8 235 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 CEP63Q96MT8 703 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 DUSP16Q9BY84 665 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 OSER1Q9NX31 292 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 SLC8A2Q9UPR5 921 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 CTNND2Q9UQB3 1225 aa19.02■□□□□ 0.64
PTPRU-207ENST00000492954 DCHS1Q96JQ0 3298 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 A0A1W2PQH9 124 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 TBX18O95935 607 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 PXNP49023 591 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-207ENST00000492954 KIF11P52732 1056 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 LRMPQ12912 555 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 CUL2Q13617 745 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 CCDC40Q4G0X9 1142 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 PRR23BQ6ZRT6 265 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 WDR5BQ86VZ2 330 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 BBS7Q8IWZ6 715 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 NMUR1Q9HB89 426 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 METTL14Q9HCE5 456 aaKnown RBP19.01■□□□□ 0.63
PTPRU-207ENST00000492954 CYLDQ9NQC7 956 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 TBC1D14Q9P2M4 693 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 RAB23Q9ULC3 237 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 SH3BP1Q9Y3L3 701 aa19.01■□□□□ 0.63
PTPRU-207ENST00000492954 ADH1CP00326 375 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 ADH5P11766 374 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 FMO5P49326 533 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 STX17P56962 302 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 MESP2Q0VG99 397 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 SIM2Q14190 667 aaPredicted RBP19■□□□□ 0.63
PTPRU-207ENST00000492954 LY6G5CQ5SRR4 150 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 C12orf40Q86WS4 652 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 SECISBP2LQ93073 1101 aaKnown RBP19■□□□□ 0.63
PTPRU-207ENST00000492954 HHIPQ96QV1 700 aa19■□□□□ 0.63
PTPRU-207ENST00000492954 FAM124BQ9H5Z6 455 aaPredicted RBP19■□□□□ 0.63
PTPRU-207ENST00000492954 ATG2BQ96BY7 2078 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 MYH10P35580 1976 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 ANTXRLA6NF34 631 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 K7EQS6 105 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 MDM4O15151 490 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 CNR2P34972 360 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 SLC6A11P48066 632 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 SEC13P55735 322 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 ARHGAP17Q68EM7 881 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 SCD5Q86SK9 330 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 SFTPA1Q8IWL2 248 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 KLF16Q9BXK1 252 aaPredicted RBP18.99■□□□□ 0.63
PTPRU-207ENST00000492954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.99■□□□□ 0.63
PTPRU-207ENST00000492954 NAGPAQ9UK23 515 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 NUDT5Q9UKK9 219 aa18.99■□□□□ 0.63
PTPRU-207ENST00000492954 CEP250Q9BV73 2442 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 BICDL2A1A5D9 508 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 RARGP13631 454 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 ATP5C1P36542 298 aaKnown RBP18.98■□□□□ 0.63
PTPRU-207ENST00000492954 UBE2HP62256 183 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 PAK1Q13153 545 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 GOLGA7BQ2TAP0 167 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 LAIR1Q6GTX8 287 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 FOXR2Q6PJQ5 311 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 SYT13Q7L8C5 426 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 CCDC186Q7Z3E2 898 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 PIGZQ86VD9 579 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 TTC30AQ86WT1 665 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 UBR7Q8N806 425 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 USP33Q8TEY7 942 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 ACDQ96AP0 544 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 OTUB2Q96DC9 234 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 CHMP5Q9NZZ3 219 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 GMEB2Q9UKD1 530 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 USP3Q9Y6I4 520 aa18.98■□□□□ 0.63
PTPRU-207ENST00000492954 MYO16Q9Y6X6 1858 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 GREM1O60565 184 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 YWHAEP62258 255 aaKnown RBP18.97■□□□□ 0.63
PTPRU-207ENST00000492954 DMC1Q14565 340 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 SGO2Q562F6 1265 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 C2orf27AQ580R0 203 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 C10orf120Q5SQS8 335 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 HTR3DQ70Z44 454 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 CEP68Q76N32 757 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 ANKRD52Q8NB46 1076 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 PNKPQ96T60 521 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 SPHK2Q9NRA0 654 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 DNMT3LQ9UJW3 386 aa18.97■□□□□ 0.63
PTPRU-207ENST00000492954 TULP2O00295 520 aa18.96■□□□□ 0.63
PTPRU-207ENST00000492954 PMM2O15305 246 aa18.96■□□□□ 0.63
PTPRU-207ENST00000492954 HOXC11O43248 304 aaPredicted RBP18.96■□□□□ 0.63
PTPRU-207ENST00000492954 TBXAS1P24557 533 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms