RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CNPY3Q9BT09 278 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 MRPL17Q9NRX2 175 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 ASNSD1Q9NWL6 643 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 RWDD3Q9Y3V2 267 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 PCDHA3Q9Y5H8 950 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 MYO16Q9Y6X6 1858 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 WDR27A2RRH5 827 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 ADAM12O43184 909 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 ERLIN1O75477 346 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 RNF8O76064 485 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 USP17L7P0C7H9 530 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SDC4P31431 198 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 BMPR1AP36894 532 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SSR1P43307 286 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SLC5A3P53794 718 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 YWHAZP63104 245 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SMC1AQ14683 1233 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 LRIT3Q3SXY7 679 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SPRED2Q7Z698 418 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 CREG2Q8IUH2 290 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 RHOT1Q8IXI2 618 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SCML4Q8N228 414 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 TTC9BQ8N6N2 239 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 PNKPQ96T60 521 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 CARD9Q9H257 536 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 RNF14Q9UBS8 474 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 SSX2IPQ9Y2D8 614 aa14.75□□□□□ -0.05
PDZRN3-210ENST00000492909 ZNF638Q14966 1978 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 LINC01553A4QN01 128 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 DPYSL4O14531 572 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 TNFRSF10BO14763 440 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 PSTPIP1O43586 416 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 VNN2O95498 520 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 CA3P07451 260 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 DNAJB2P25686 324 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 OAS2P29728 719 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 CTNNB1P35222 781 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 MARCKSL1P49006 195 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 PEX5P50542 639 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 RWDD2BP57060 319 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 CREMQ03060 361 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 CKAP4Q07065 602 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 MGAT5BQ3V5L5 792 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 BEND6Q5SZJ8 279 aaPredicted RBP14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 CCDC181Q5TID7 509 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 PM20D1Q6GTS8 502 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 ZNF461Q8TAF7 563 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 IRGQQ8WZA9 623 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 NDRG1Q92597 394 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 CFAP57Q96MR6 1250 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 ZBP1Q9H171 429 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 NKX2-4Q9H2Z4 354 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 USP3Q9Y6I4 520 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 GREB1Q4ZG55 1949 aa14.74□□□□□ -0.05
PDZRN3-210ENST00000492909 LRCH4O75427 683 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 DAB1O75553 588 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 CTSAP10619 480 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 HAPLN1P10915 354 aaPredicted RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 MATKP42679 507 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 PTPN9P43378 593 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 TAS2R40P59535 323 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 DUSP4Q13115 394 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 DDR2Q16832 855 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 CCDC14Q49A88 953 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 DCAF12L1Q5VU92 463 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 TPGS2Q68CL5 300 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 NUP93Q8N1F7 819 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 SCAMP5Q8TAC9 235 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 SEPT5Q99719 369 aaPredicted RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 DDX23Q9BUQ8 820 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 PLVAPQ9BX97 442 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 POPDC2Q9HBU9 364 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 AFF4Q9UHB7 1163 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 SLC27A5Q9Y2P5 690 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 CHD9Q3L8U1 2897 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 YJEFN3A6XGL0 299 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 E7ENQ6 273 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 CEP104O60308 925 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 ABLIM3O94929 683 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 LTFP02788 710 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 PCK1P35558 622 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 PAFAH1B1P43034 410 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 GPR15P49685 360 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 RPL10AP62906 217 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 SMAD3P84022 425 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 ATP11AP98196 1134 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 IFRD2Q12894 506 aaPredicted RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 HADHQ16836 314 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 CDO1Q16878 200 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 C15orf59Q2T9L4 293 aaPredicted RBP14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 LRRC38Q5VT99 294 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 HDXQ7Z353 690 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 DEFB106AQ8N104 65 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 AUTS2Q8WXX7 1259 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 CRISPLD1Q9H336 500 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 FBXO44Q9H4M3 255 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 FNIP2Q9P278 1114 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms