RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 IFI35P80217 286 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ARF1P84077 181 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 MYL7Q01449 175 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 OCRLQ01968 901 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 NRG1Q02297 640 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 DSG1Q02413 1049 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 PPATQ06203 517 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 COG2Q14746 738 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CNN3Q15417 329 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 MSS51Q4VC12 460 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 WDR44Q5JSH3 913 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 EMC10Q5UCC4 262 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 TCERG1LQ5VWI1 586 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 FIP1L1Q6UN15 594 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 NPNTQ6UXI9 565 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LRRC31Q6UY01 552 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SLC30A10Q6XR72 485 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 BEND5Q7L4P6 421 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 MIER3Q7Z3K6 550 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 NT5DC3Q86UY8 548 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LRRTM4Q86VH4 590 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 DENND1CQ8IV53 801 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SPNS2Q8IVW8 549 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CMIPQ8IY22 773 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CACNA2D3Q8IZS8 1091 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SYCE1Q8N0S2 351 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 IQCKQ8N0W5 287 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 GALNT15Q8N3T1 639 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LRRC71Q8N4P6 559 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 TMCO5AQ8N6Q1 288 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 METTL13Q8N6R0 699 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 GOLGA6L1Q8N7Z2 621 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 USP38Q8NB14 1042 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CLRN3Q8NCR9 226 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF540Q8NDQ6 660 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SLC17A8Q8NDX2 589 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LMO3Q8TAP4 145 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 FAM76AQ8TAV0 307 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LNX1Q8TBB1 728 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 PIGOQ8TEQ8 1089 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 WHAMMQ8TF30 809 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CHTF18Q8WVB6 975 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CASKIN2Q8WXE0 1202 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 NANOS1Q8WY41 292 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CTNNBL1Q8WYA6 563 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 RIN2Q8WYP3 895 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LRTOMTQ8WZ04 291 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 RFFLQ8WZ73 363 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SEC14L1Q92503 715 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF75CPQ92670 426 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 HES6Q96HZ4 224 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 MS4A14Q96JA4 679 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CLMNQ96JQ2 1002 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 PSMB7Q99436 277 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LXNQ9BS40 222 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF577Q9BSK1 485 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 C1QTNF2Q9BXJ5 285 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 TEX13BQ9BXU2 312 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ARHGAP39Q9C0H5 1083 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 GPR88Q9GZN0 384 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ADAM19Q9H013 955 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 INTS2Q9H0H0 1204 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ISCUQ9H1K1 167 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 C2orf40Q9H1Z8 148 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ST6GALNAC4Q9H4F1 302 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SLITRK6Q9H5Y7 841 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 TMEM206Q9H813 350 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ACAD9Q9H845 621 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 CHCHD3Q9NX63 227 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 WRAP73Q9P2S5 460 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LAMP5Q9UJQ1 280 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 RPS6KA6Q9UK32 745 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 DBR1Q9UK59 544 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 DNAJC12Q9UKB3 198 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LHX6Q9UPM6 363 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 C2CD2Q9Y426 696 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 SAMM50Q9Y512 469 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 KCNMB2Q9Y691 235 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ZFP37Q9Y6Q3 630 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 ATAD5Q96QE3 1844 aa3.98□□□□□ -1.77
ATPAF1-206ENST00000492233 LRRC14BA6NHZ5 514 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 SRRM3A6NNA2 597 aaPredicted RBP3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 CBX4O00257 560 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 PGRMC1O00264 195 aaKnown RBP3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 KCNK3O14649 394 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 FSCN2O14926 492 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 SLC7A4O43246 635 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 DAPK3O43293 454 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 RAD51CO43502 376 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 CHMP2AO43633 222 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 B3GALT2O43825 422 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 CEP104O60308 925 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 TSPAN3O60637 253 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 EXOC3O60645 756 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 RAD17O75943 681 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 PAPLNO95428 1278 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 PLS3P13797 630 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 NME1P15531 152 aaKnown RBP3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 RAG1P15918 1043 aa3.97□□□□□ -1.77
ATPAF1-206ENST00000492233 HDCP19113 662 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms