RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 NR1H3Q13133 447 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 INTS6LQ5JSJ4 861 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 EOGTQ5NDL2 527 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 SYCP2LQ5T4T6 812 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 MCTP1Q6DN14 999 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 OSTM1Q86WC4 334 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 DEFB119Q8N690 84 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 IL17RCQ8NAC3 791 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 ZSWIM2Q8NEG5 633 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 CXorf38Q8TB03 319 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 RAD54LQ92698 747 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 LIN37Q96GY3 246 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 AK8Q96MA6 479 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 ZNF560Q96MR9 790 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 ST6GALNAC4Q9H4F1 302 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 ZHX3Q9H4I2 956 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 IL21RQ9HBE5 538 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 CPNE5Q9HCH3 593 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 ANAPC1Q9H1A4 1944 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 IGHV1OR15-9A0A0B4J2B8 117 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 A0A1B0GTW7 788 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 SGK1O00141 431 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 HCRTO43612 131 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 BRINP1O60477 761 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 ZNF217O75362 1048 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 IL18RAPO95256 599 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 KRT18P05783 430 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 PLCG1P19174 1290 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 POLR2BP30876 1174 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 ABCD1P33897 745 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 UBA7P41226 1012 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 PNPLA4P41247 253 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 ZXDBP98169 803 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 WDR45BQ5MNZ6 344 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 NT5DC4Q86YG4 428 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 RGL4Q8IZJ4 473 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 ALLCQ8N6M5 410 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 FOXJ1Q92949 421 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 CALML4Q96GE6 196 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 FAM84AQ96KN4 292 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 DDX43Q9NXZ2 648 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 ARHGAP26Q9UNA1 814 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 AGAP1Q9UPQ3 857 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 CACNA1DQ01668 2161 aa12.51□□□□□ -0.41
CACNA1C-228ENST00000492150 ICE1Q9Y2F5 2266 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 TCRBV21S2A2A0A5A6 115 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 SUV39H1O43463 412 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 HUS1O60921 280 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 TBCAO75347 108 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 NFATC1O95644 943 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 ITGB3P05106 788 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 HDCP19113 662 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 GRK6P43250 576 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 MYL7Q01449 175 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 GRIN1Q05586 938 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 MESP2Q0VG99 397 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 C6orf132Q5T0Z8 1188 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 ZNF720Q7Z2F6 126 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 SFTPA1Q8IWL2 248 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 SCN4BQ8IWT1 228 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 DNASE2BQ8WZ79 361 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 GDAP2Q9NXN4 497 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 MAN2B2Q9Y2E5 1009 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 KNL1Q8NG31 2342 aa12.5□□□□□ -0.41
CACNA1C-228ENST00000492150 TMEM131Q92545 1883 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 GABRDO14764 452 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 PPP1R37O75864 691 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 KLF8O95600 359 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 C1SP09871 688 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 POU3F2P20265 443 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 MAGEA11P43364 429 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 SLC6A11P48066 632 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 PCBP4P57723 403 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 KCNA1Q09470 495 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 TARDBPQ13148 414 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 KCNB1Q14721 858 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 POSTNQ15063 836 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 FAM171BQ6P995 826 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 XKR5Q6UX68 686 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 SFR1Q86XK3 245 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 SPATA2LQ8IUW3 424 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 BRSK2Q8IWQ3 736 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 CACTIN-AS1Q8N1I8 211 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 LRRC52Q8N7C0 313 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms