RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SNX25Q9H3E2 840 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF334Q9HCZ1 680 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 ATXN2Q99700 1313 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 MYH10P35580 1976 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 NDUFAB1O14561 156 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 LAMP2P13473 410 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 CEBPBP17676 345 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 ALDH1A3P47895 512 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 NAP1L1P55209 391 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 NOP14P78316 857 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 SMARCB1Q12824 385 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 ORC1Q13415 861 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 FBXL13Q8NEE6 735 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 FGF13Q92913 245 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 MYLPFQ96A32 169 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 AVENQ9NQS1 362 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 RAB20Q9NX57 234 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 COQ4Q9Y3A0 265 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF638Q14966 1978 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 A8MXQ7 604 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 EPHB6O15197 1021 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 FMO5P49326 533 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TUFMP49411 452 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 EPHB3P54753 998 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 EPHA5P54756 1037 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 NFE2Q16621 373 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 DDR2Q16832 855 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TTMPQ5BVD1 217 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 MDH1BQ5I0G3 518 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 DNAJB7Q7Z6W7 309 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TRIM59Q8IWR1 403 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TSEN2Q8NCE0 465 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 MYCBPAPQ8TBZ2 947 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 PSMG2Q969U7 264 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 PCED1BQ96HM7 432 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TWNKQ96RR1 684 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 RPP25Q9BUL9 199 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TLR10Q9BXR5 811 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 METTL14Q9HCE5 456 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 RBM12Q9NTZ6 932 aaKnown RBP9.92□□□□□ -0.82
BRCA1-219ENST00000491747 TMEM30AQ9NV96 361 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.92□□□□□ -0.827e-7■□□□□ 9.9
BRCA1-219ENST00000491747 EPS15L1Q9UBC2 864 aa9.92□□□□□ -0.82
BRCA1-219ENST00000491747 ANAPC1Q9H1A4 1944 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 CUL9Q8IWT3 2517 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 CLDN5O00501 218 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 MYL4P12829 197 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 BDNFP23560 247 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 LIG3P49916 1009 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 NDST1P52848 882 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 CACNA2D1P54289 1103 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 TDRD12Q587J7 1177 aaKnown RBP9.91□□□□□ -0.82
BRCA1-219ENST00000491747 CFAP58Q5T655 872 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 KLHDC7AQ5VTJ3 777 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 PAQR9Q6ZVX9 377 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 SPATA2LQ8IUW3 424 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-219ENST00000491747 ELMOD1Q8N336 334 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 WHAMMQ8TF30 809 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 BAP1Q92560 729 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 ARL8AQ96BM9 186 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 MCRS1Q96EZ8 462 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 ZSWIM3Q96MP5 696 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 ZIM3Q96PE6 472 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 B3GNT5Q9BYG0 378 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 KCNK12Q9HB15 430 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 C11orf16Q9NQ32 467 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 CDH7Q9ULB5 785 aa9.91□□□□□ -0.82
BRCA1-219ENST00000491747 MRPS23Q9Y3D9 190 aaKnown RBP9.91□□□□□ -0.82
BRCA1-219ENST00000491747 GRID2IPA4D2P6 1211 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 DCXO43602 365 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 KIAA0754O94854 1291 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 HMGA1P17096 107 aaKnown RBP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 GFPT1Q06210 699 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 PLD1Q13393 1074 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 ASTE1Q2TB18 679 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 STXBP5Q5T5C0 1151 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 PARM1Q6UWI2 310 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 MICALCLQ6ZW33 695 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 GAREM2Q75VX8 874 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 PDZD4Q76G19 769 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 ACOT1Q86TX2 421 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 B3GALNT2Q8NCR0 500 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 LMO3Q8TAP4 145 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 SHKBP1Q8TBC3 707 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 FGF14Q92915 247 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 IL21Q9HBE4 155 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 GDF3Q9NR23 364 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 NUP210Q8TEM1 1887 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 A0A1W2PRU2 124 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 ANHXE9PGG2 379 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 KRT14P02533 472 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 CD58P19256 250 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 MRPS25P82663 173 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms