RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CBWD6Q4V339 395 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 CBWD3Q5JTY5 395 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 CBWD5Q5RIA9 395 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 TPGS1Q6ZTW0 290 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 SLC9A9Q8IVB4 645 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 FAM186BQ8IYM0 893 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 IL17RCQ8NAC3 791 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 TXNDC5Q8NBS9 432 aaKnown RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 SLITRK1Q96PX8 696 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 IER2Q9BTL4 223 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 DMAP1Q9NPF5 467 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 PLK2Q9NYY3 685 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 CIZ1Q9ULV3 898 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-211ENST00000491581 TRAF3IP3Q9Y228 551 aa9.43□□□□□ -0.9
HDAC3-211ENST00000491581 PIK3R2O00459 728 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 GIPC1O14908 333 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 NFATC1O95644 943 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 HMBSP08397 361 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 ZDHHC11BP0C7U3 371 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 ADH5P11766 374 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 TCF3P15923 654 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 ACO1P21399 889 aaKnown RBP9.42□□□□□ -0.9
HDAC3-211ENST00000491581 GBP1P32455 592 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 PRCPP42785 496 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 KIR2DL1P43626 348 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SNRPFP62306 86 aaKnown RBP9.42□□□□□ -0.9
HDAC3-211ENST00000491581 LMNB2Q03252 620 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 LRMPQ12912 555 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 CSRP2Q16527 193 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SGSM1Q2NKQ1 1148 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 ANO4Q32M45 955 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 PPM1JQ5JR12 505 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 HECTD3Q5T447 861 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 ATL3Q6DD88 541 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SYT13Q7L8C5 426 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SCD5Q86SK9 330 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 CRYBG2Q8N1P7 616 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SYNPOQ8N3V7 929 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 TMC2Q8TDI7 906 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 CYFIP2Q96F07 1278 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SMARCD1Q96GM5 515 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 IL37Q9NZH6 218 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 MBD1Q9UIS9 605 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-211ENST00000491581 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 RAD54BQ9Y620 910 aa9.42□□□□□ -0.9
HDAC3-211ENST00000491581 SOBPA7XYQ1 873 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 WASH3PC4AMC7 463 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 CALUO43852 315 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 TLR5O60602 858 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 TULP3O75386 442 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 EPN2O95208 641 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 KAT7O95251 611 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 TOP3BO95985 862 aaKnown RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 KLKB1P03952 638 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 MPLP40238 635 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 CREB5Q02930 508 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 ADAM9Q13443 819 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 AASDHQ4L235 1098 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 EGFLAMQ63HQ2 1017 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 ANKRD40Q6AI12 368 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 KIAA1211LQ6NV74 962 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 CACNA2D4Q7Z3S7 1137 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 FMR1NBQ8N0W7 255 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 TSTD1Q8NFU3 115 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 GOLGA5Q8TBA6 731 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 HMGB4Q8WW32 186 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 KAT5Q92993 513 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 SECISBP2LQ93073 1101 aaKnown RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 PNKPQ96T60 521 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 KLF16Q9BXK1 252 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 CSNK1G1Q9HCP0 422 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 ARHGEF4Q9NR80 690 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
HDAC3-211ENST00000491581 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 CLEC4EQ9ULY5 219 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 FRMD4BQ9Y2L6 1034 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 SH3BP1Q9Y3L3 701 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 LAMA1P25391 3075 aa9.41□□□□□ -0.9
HDAC3-211ENST00000491581 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.9
HDAC3-211ENST00000491581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 FAM92AA1XBS5 289 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 PRRT4C9JH25 899 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 NEDD8-MDP1E9PL57 170 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 SLC30A4O14863 429 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 ATG13O75143 517 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 GADD45BO75293 160 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-211ENST00000491581 CILPO75339 1184 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 KRT37O76014 449 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 RTN3O95197 1032 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-211ENST00000491581 APBB3O95704 486 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 FAM200BP0CF97 657 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 RARGP13631 454 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 HOXA6P31267 233 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 PTGER3P43115 390 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 RAD23BP54727 409 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 INCA1Q0VD86 236 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 CRY1Q16526 586 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms