RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
COL2A1-207ENST00000490609 HMGXB4Q9UGU5 601 aa16.51■□□□□ 0.23
COL2A1-207ENST00000490609 R3HCC1Q9Y3T6 440 aaKnown RBP16.51■□□□□ 0.23
COL2A1-207ENST00000490609 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 PVALEFA0A1B0GWK0 134 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 SLC9A3R1O14745 358 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-207ENST00000490609 TBX18O95935 607 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 ADH5P11766 374 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 GRIA2P42262 883 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 TNFRSF4P43489 277 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 SLC5A3P53794 718 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 AMPD3Q01432 767 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 ORC1Q13415 861 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-207ENST00000490609 RESP18Q5W5W9 173 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 TMEFF1Q8IYR6 380 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 NAT16Q8N8M0 369 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 CCDC26Q8TAB7 109 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-207ENST00000490609 FBXO32Q969P5 355 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 KCTD10Q9H3F6 313 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 CSNK1G1Q9HCP0 422 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 ARHGEF4Q9NR80 690 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 GMIPQ9P107 970 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 RALYQ9UKM9 306 aaKnown RBP16.5■□□□□ 0.23
COL2A1-207ENST00000490609 CELSR3Q9NYQ7 3312 aa16.5■□□□□ 0.23
COL2A1-207ENST00000490609 HHLA1C9JL84 531 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 TULP3O75386 442 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 RTN3O95197 1032 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-207ENST00000490609 APODP05090 189 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 AFMP43652 599 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 DHPSP49366 369 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-207ENST00000490609 TRPC3Q13507 836 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 PKP1Q13835 747 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 HECTD3Q5T447 861 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 SH3PXD2AQ5TCZ1 1133 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 GPRIN1Q7Z2K8 1008 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 CRYBG2Q8N1P7 616 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 PIGKQ92643 395 aa16.49■□□□□ 0.23
COL2A1-207ENST00000490609 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-207ENST00000490609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 A0A1W2PQF6 199 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 C1QTNF9BB2RNN3 333 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 KHNYNO15037 678 aaKnown RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 HOXC11O43248 304 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 C1QTNF9P0C862 333 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 CCDC130P13994 396 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 SPINK2P20155 84 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 TUBP50607 506 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 NOVA1P51513 510 aaKnown RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 NCOA4Q13772 614 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 FOXD4L6Q3SYB3 417 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 PEAR1Q5VY43 1037 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 FOXD4L3Q6VB84 417 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 SCARA5Q6ZMJ2 495 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 CYP2U1Q7Z449 544 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 TTC30AQ86WT1 665 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 SLC9A9Q8IVB4 645 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 C12orf29Q8N999 325 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 ACOX2Q99424 681 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 KLF16Q9BXK1 252 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 MAGEF1Q9HAY2 307 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
COL2A1-207ENST00000490609 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-207ENST00000490609 LOC400499M0QZD8 3231 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
COL2A1-207ENST00000490609 EXOC3O60645 756 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 AP1G2O75843 785 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 ADH1CP00326 375 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 GABRG2P18507 467 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 GAD2Q05329 585 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 ZNF699Q32M78 642 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 ZACNQ401N2 412 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 HSF5Q4G112 596 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-207ENST00000490609 SPOPLQ6IQ16 392 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 ARMCX6Q7L4S7 300 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 C11orf74Q86VG3 221 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 DDX42Q86XP3 938 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL2A1-207ENST00000490609 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 HMGB4Q8WW32 186 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 OTUB2Q96DC9 234 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 DMAP1Q9NPF5 467 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-207ENST00000490609 TMEM9BQ9NQ34 198 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 FSCN3Q9NQT6 498 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 SPHK2Q9NRA0 654 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 STARD13Q9Y3M8 1113 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 PLXNB3Q9ULL4 1909 aa16.47■□□□□ 0.23
COL2A1-207ENST00000490609 CKAP5Q14008 2032 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 NUMA1Q14980 2115 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 TCRBV21S2A2A0A5A6 115 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 PROS1P07225 676 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 CISD3P0C7P0 127 aa16.46■□□□□ 0.23
COL2A1-207ENST00000490609 CSRP1P21291 193 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms