RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 HTR3DQ70Z44 454 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 PLPP6Q8IY26 295 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 PHTF2Q8N3S3 785 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 TTC39CQ8N584 583 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 USP33Q8TEY7 942 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 OTUB2Q96DC9 234 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 CYFIP2Q96F07 1278 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 ZC3H10Q96K80 434 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 NT5C1AQ9BXI3 368 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 UBXN6Q9BZV1 441 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 FBXO44Q9H4M3 255 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 GMIPQ9P107 970 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 CFAP97Q9P2B7 532 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 TBC1D14Q9P2M4 693 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 EBF1Q9UH73 591 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 PMM2O15305 246 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 SLC16A3O15427 465 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 KIF11P52732 1056 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 FKBP3Q00688 224 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 SRSF5Q13243 272 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 ORC1Q13415 861 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 ARHGAP17Q68EM7 881 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 GAB3Q8WWW8 586 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 WBP2Q969T9 261 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 LOXL4Q96JB6 756 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 MED10Q9BTT4 135 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 KLF16Q9BXK1 252 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 DUSP16Q9BY84 665 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 CCSER2Q9H7U1 834 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 POLR3BQ9NW08 1133 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 OSER1Q9NX31 292 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 RAB20Q9NX57 234 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 HELZP42694 1942 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-210ENST00000490099 PRR5-ARHGAP8B1AHC4 643 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 HOXC11O43248 304 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 STX10O60499 249 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 SMC2O95347 1197 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 ABL1P00519 1130 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 FAM200BP0CF97 657 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 MBL2P11226 248 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 BMP6P22004 513 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 MXI1P50539 228 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 RAD23BP54727 409 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 MAP3K7CLP57077 242 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 MRPS21P82921 87 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 ARHGAP8P85298 464 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 LMNB2Q03252 620 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 LRRC63Q05C16 580 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 CBWD6Q4V339 395 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 CBWD3Q5JTY5 395 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 CBWD5Q5RIA9 395 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 GPRIN1Q7Z2K8 1008 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 SCD5Q86SK9 330 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 RASSF3Q86WH2 238 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 FAM160A2Q8N612 972 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC4A11Q8NBS3 891 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 TATDN2Q93075 761 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC35C1Q96A29 364 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 DHTKD1Q96HY7 919 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 TLR8Q9NR97 1041 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 CISHQ9NSE2 258 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 FAM49BQ9NUQ9 324 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC8A2Q9UPR5 921 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 NCOR2Q9Y618 2525 aa10.27□□□□□ -0.77
TMEM39A-210ENST00000490099 SPTBN2O15020 2390 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 MYO18AQ92614 2054 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 ANTXRLA6NF34 631 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 TLR5O60602 858 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 APBB3O95704 486 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 TBX18O95935 607 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 ADH1CP00326 375 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 EPB41P11171 864 aaKnown RBP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 HOXB3P14651 431 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 SDHBP21912 280 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 GRIA2P42262 883 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 TNFRSF4P43489 277 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC6A11P48066 632 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 DMC1Q14565 340 aa10.26□□□□□ -0.77
TMEM39A-210ENST00000490099 CSRP2Q16527 193 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms