RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PABPC1P11940 636 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CYP11B1P15538 503 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CHRM3P20309 590 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 OAZ1P54368 228 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 NFIXQ14938 502 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 RBM43Q6ZSC3 357 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 SCUBE2Q9NQ36 999 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ERI2A8K979 691 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 RNF103O00237 685 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CDH18Q13634 790 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 FAM45BPQ6NSW5 357 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CCDC60Q8IWA6 550 aaPredicted RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 PCSK9Q8NBP7 692 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 TRIM63Q969Q1 353 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 TMEM143Q96AN5 459 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ATXN7L3BQ96GX2 97 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 MAF1Q9H063 256 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 NQO1P15559 274 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 RASA1P20936 1047 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CACNB3P54284 484 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ACTN3Q08043 901 aaPredicted RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 RPRD1BQ9NQG5 326 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 METTL5Q9NRN9 209 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 TAGLN3Q9UI15 199 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 PHTF1Q9UMS5 762 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 DCCP43146 1447 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 NUDT2P50583 147 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 CAMK2GQ13555 558 aaPredicted RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ULK2Q8IYT8 1036 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 IPMKQ8NFU5 416 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 RAD18Q9NS91 495 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 KLHL28Q9NXS3 571 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 SFMBT1Q9UHJ3 866 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 DIP2CQ9Y2E4 1556 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 USP27XA6NNY8 438 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 PDZK1P1A8MUH7 402 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 TRIM24O15164 1050 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 GYS2P54840 703 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 PRKAA1Q13131 559 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 KYAT3Q6YP21 454 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 KRT73Q86Y46 540 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ENGASEQ8NFI3 743 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ATXN2LQ8WWM7 1075 aaKnown RBP9.13□□□□□ -0.95
LSAMP-205ENST00000490035 ZDHHC15Q96MV8 337 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 UGT2B28Q9BY64 529 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 TMBIM4Q9HC24 238 aa9.13□□□□□ -0.95
LSAMP-205ENST00000490035 EPHB2P29323 1055 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 MTF1Q14872 753 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ANKS6Q68DC2 871 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CHSY1Q86X52 802 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 C4orf19Q8IY42 314 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TMEM106CQ9BVX2 250 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ZSCAN32Q9NX65 697 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF70Q9UC06 446 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 PTENP60484 403 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 GNA13Q14344 377 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 STK40Q8N2I9 435 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CGRRF1Q99675 332 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 GGA2Q9UJY4 613 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 PIK3CDO00329 1044 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 NFIBO00712 420 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CYP2C18P33260 490 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 MAGEA10P43363 369 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 NPY2RP49146 381 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 PLOD1Q02809 727 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CCDC142Q17RM4 750 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TIMM50Q3ZCQ8 353 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TRAF7Q6Q0C0 670 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 FAM83AQ86UY5 434 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 APOL4Q9BPW4 351 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 C1QTNF7Q9BXJ2 289 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 SLC39A10Q9ULF5 831 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ZMYND8Q9ULU4 1186 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 DYRK1BQ9Y463 629 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TSHRP16473 764 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 DNAJC3Q13217 504 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF284Q2VY69 593 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 COBLL1Q53SF7 1204 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 IKBIPQ70UQ0 350 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TRIM48Q8IWZ4 208 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TRIM8Q9BZR9 551 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 DMAP1Q9NPF5 467 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 VPS51Q9UID3 782 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 RABGEF1Q9UJ41 708 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF711Q9Y462 761 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-205ENST00000490035 ANXA6P08133 673 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TAB1Q15750 504 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 CDC42EP5Q6NZY7 148 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 EID3Q8N140 333 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 C9orf72Q96LT7 481 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 GLT1D1Q96MS3 346 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 TRIM51Q9BSJ1 452 aa9.12□□□□□ -0.95
LSAMP-205ENST00000490035 THUMPD3Q9BV44 507 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms