RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PCDHA11Q9Y5I1 949 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 IRAK3Q9Y616 596 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 C2CD2LO14523 706 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 GRAP2O75791 330 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 RNF8O76064 485 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 RTN3O95197 1032 aaPredicted RBP14.82□□□□□ -0.04
VPS26A-205ENST00000489656 USP17L7P0C7H9 530 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 ATF2P15336 505 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 RPL17P18621 184 aaKnown RBP14.82□□□□□ -0.04
VPS26A-205ENST00000489656 CXCR5P32302 372 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 CTNNB1P35222 781 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 NOS2P35228 1153 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 MARCKSL1P49006 195 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 TUFMP49411 452 aaKnown RBP14.82□□□□□ -0.04
VPS26A-205ENST00000489656 CDR1P51861 262 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 RWDD2BP57060 319 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 TAS2R40P59535 323 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 STRADAQ7RTN6 431 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 BNIPLQ7Z465 357 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 KATNAL2Q8IYT4 538 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 TTC9BQ8N6N2 239 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 ARFGAP1Q8N6T3 406 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 ACTRT1Q8TDG2 376 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 GDF15Q99988 308 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 CRISPLD1Q9H336 500 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 FBXO44Q9H4M3 255 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 SCML2Q9UQR0 700 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 USTQ9Y2C2 406 aa14.82□□□□□ -0.04
VPS26A-205ENST00000489656 YJEFN3A6XGL0 299 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 E7ENQ6 273 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 ZNF185O15231 689 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 ENDOD1O94919 500 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 SLU7O95391 586 aaKnown RBP14.81□□□□□ -0.04
VPS26A-205ENST00000489656 LTFP02788 710 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 FYNP06241 537 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 SLC25A11Q02978 314 aaKnown RBP14.81□□□□□ -0.04
VPS26A-205ENST00000489656 ITIH3Q06033 890 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 DUSP4Q13115 394 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 CLUL1Q15846 466 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 DDR2Q16832 855 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 HADHQ16836 314 aaKnown RBP14.81□□□□□ -0.04
VPS26A-205ENST00000489656 SLC25A52Q3SY17 297 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 DENND5BQ6ZUT9 1274 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 TNS4Q8IZW8 715 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 DEFB106AQ8N104 65 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 MNS1Q8NEH6 495 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 SCAMP5Q8TAC9 235 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 FAM149B1Q96BN6 582 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 RPGRIP1Q96KN7 1286 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 PSMB7Q99436 277 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 NPY6RQ99463 290 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
VPS26A-205ENST00000489656 STAP1Q9ULZ2 295 aa14.81□□□□□ -0.04
VPS26A-205ENST00000489656 LAMA2P24043 3122 aaKnown RBP14.81□□□□□ -0.04
VPS26A-205ENST00000489656 C1RP00736 705 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 KRT7P08729 469 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 MIPP30301 263 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 GPR15P49685 360 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 DNA2P51530 1060 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 C15orf59Q2T9L4 293 aaPredicted RBP14.8□□□□□ -0.04
VPS26A-205ENST00000489656 MGAT5BQ3V5L5 792 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 DAB2IPQ5VWQ8 1189 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 HFE2Q6ZVN8 426 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 TCEAL8Q8IYN2 117 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 EXD1Q8NHP7 514 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 SPPL3Q8TCT6 385 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 FAM172AQ8WUF8 416 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 NDRG1Q92597 394 aaKnown RBP14.8□□□□□ -0.04
VPS26A-205ENST00000489656 GOLGA1Q92805 767 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 PGAP3Q96FM1 320 aaPredicted RBP14.8□□□□□ -0.04
VPS26A-205ENST00000489656 CAPZA3Q96KX2 299 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 CFAP57Q96MR6 1250 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 SEPT5Q99719 369 aaPredicted RBP14.8□□□□□ -0.04
VPS26A-205ENST00000489656 TTLL2Q9BWV7 592 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 CARD6Q9BX69 1037 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 SLC27A5Q9Y2P5 690 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
VPS26A-205ENST00000489656 DOCK4Q8N1I0 1966 aa14.8□□□□□ -0.04
VPS26A-205ENST00000489656 GRXCR1A8MXD5 290 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 PGRMC1O00264 195 aaKnown RBP14.79□□□□□ -0.04
VPS26A-205ENST00000489656 PDE2AO00408 941 aaPredicted RBP14.79□□□□□ -0.04
VPS26A-205ENST00000489656 FSCN2O14926 492 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 TEX28O15482 410 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
VPS26A-205ENST00000489656 CEP104O60308 925 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 SEC24AO95486 1093 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 TRUB2O95900 331 aaKnown RBP14.79□□□□□ -0.04
VPS26A-205ENST00000489656 TCF4P15884 667 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 ATF6P18850 670 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 DNAJB2P25686 324 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 PAFAH1B1P43034 410 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 PSEN1P49768 467 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 TERF1P54274 439 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 HDAC4P56524 1084 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 ERVK-21P61565 698 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 SMC1AQ14683 1233 aaKnown RBP14.79□□□□□ -0.04
VPS26A-205ENST00000489656 DCAF6Q58WW2 860 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 SEL1L2Q5TEA6 688 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 CCDC181Q5TID7 509 aa14.79□□□□□ -0.04
VPS26A-205ENST00000489656 OTUD1Q5VV17 481 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms