RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 DCBLD1Q8N8Z6 715 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 NUP58Q9BVL2 599 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 DPH1Q9BZG8 443 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 MKRN2Q9H000 416 aaKnown RBP16.11■□□□□ 0.17
UFD1-209ENST00000489406 ABCB6Q9NP58 842 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 GJB4Q9NTQ9 266 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 TRPM5Q9NZQ8 1165 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 TBC1D14Q9P2M4 693 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 MAN2B2Q9Y2E5 1009 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 PCDHB1Q9Y5F3 818 aa16.11■□□□□ 0.17
UFD1-209ENST00000489406 A0A1B0GTQ1 180 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 LAD1O00515 517 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 SLC16A4O15374 487 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 HOXC11O43248 304 aaPredicted RBP16.1■□□□□ 0.17
UFD1-209ENST00000489406 ABL1P00519 1130 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 STRN3Q13033 797 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 PDIA5Q14554 519 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 ENOX2Q16206 610 aaKnown RBP16.1■□□□□ 0.17
UFD1-209ENST00000489406 CCDC142Q17RM4 750 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 FAM124AQ86V42 546 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 TMEM25Q86YD3 366 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 CACTIN-AS1Q8N1I8 211 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 LEO1Q8WVC0 666 aaPredicted RBP16.1■□□□□ 0.17
UFD1-209ENST00000489406 SCFD1Q8WVM8 642 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 BHMT2Q9H2M3 363 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 STARD5Q9NSY2 213 aa16.1■□□□□ 0.17
UFD1-209ENST00000489406 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
UFD1-209ENST00000489406 SCN1AP35498 2009 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 CPLX1O14810 134 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 TRAK2O60296 914 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 ITGAVP06756 1048 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 TAF6P49848 677 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 INSM1Q01101 510 aaPredicted RBP16.09■□□□□ 0.17
UFD1-209ENST00000489406 TLE1Q04724 770 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 CACUL1Q86Y37 369 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 DAW1Q8N136 415 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 PSMG3-AS1Q96PY0 264 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 C6orf106Q9H6K1 298 aaPredicted RBP16.09■□□□□ 0.17
UFD1-209ENST00000489406 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
UFD1-209ENST00000489406 GTF3C4Q9UKN8 822 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 C2CD3Q4AC94 2353 aa16.09■□□□□ 0.17
UFD1-209ENST00000489406 ZNF840PA6NDX5 716 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 GFRA2O00451 464 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 WNT7AO00755 349 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 NEMFO60524 1076 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 MBL2P11226 248 aaPredicted RBP16.08■□□□□ 0.16
UFD1-209ENST00000489406 ABCB4P21439 1286 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
UFD1-209ENST00000489406 RPA1P27694 616 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 RIPPLY3P57055 190 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 USP46P62068 366 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 STARD3Q14849 445 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 ADAT2Q7Z6V5 191 aaKnown RBP16.08■□□□□ 0.16
UFD1-209ENST00000489406 TMPRSS6Q8IU80 811 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
UFD1-209ENST00000489406 SIPA1Q96FS4 1042 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 SPHK2Q9NRA0 654 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 STON1Q9Y6Q2 735 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 TLN1Q9Y490 2541 aaKnown RBP16.08■□□□□ 0.16
UFD1-209ENST00000489406 FBN2P35556 2912 aa16.08■□□□□ 0.16
UFD1-209ENST00000489406 DFNA5O60443 496 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 OLFM2O95897 454 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 MT-CO3P00414 261 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 GABREP78334 506 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 NR5A1Q13285 461 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 ILKQ13418 452 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 AAMPQ13685 434 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 INTS6LQ5JSJ4 861 aaKnown RBP16.07■□□□□ 0.16
UFD1-209ENST00000489406 ZPBP2Q6X784 338 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 CCDC81Q6ZN84 652 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 DDX42Q86XP3 938 aaKnown RBP eCLIP16.07■□□□□ 0.16
UFD1-209ENST00000489406 LSMEM2Q8N112 164 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 RFFLQ8WZ73 363 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
UFD1-209ENST00000489406 VCPIP1Q96JH7 1222 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 JAKMIP1Q96N16 626 aaKnown RBP16.07■□□□□ 0.16
UFD1-209ENST00000489406 TSPAN18Q96SJ8 248 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 AGXT2Q9BYV1 514 aa16.07■□□□□ 0.16
UFD1-209ENST00000489406 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.07■□□□□ 0.16
UFD1-209ENST00000489406 TCHHQ07283 1943 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 BLACEA4D250 179 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 SFI1A8K8P3 1242 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 HIP1RO75146 1068 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 IGLV3-19P01714 112 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 ACADMP11310 421 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 ITGB6P18564 788 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 ERVPABLB-1P60509 514 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 ORC1Q13415 861 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 ECM1Q16610 540 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 LINC00303Q3SY05 128 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 BBS7Q8IWZ6 715 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 SAP25Q8TEE9 199 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 OTUB2Q96DC9 234 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 ELF4Q99607 663 aaPredicted RBP16.06■□□□□ 0.16
UFD1-209ENST00000489406 CCSER1Q9C0I3 900 aa16.06■□□□□ 0.16
UFD1-209ENST00000489406 PCED1AQ9H1Q7 454 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms