RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RGS16O15492 202 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 TREHO43280 583 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 TTC4O95801 387 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CYP2C9P11712 490 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 DARSP14868 501 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 TSHRP16473 764 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 PSMA2P25787 234 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 KLRC2P26717 231 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ADCY8P40145 1251 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CDKN2BP42772 138 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 GPD2P43304 727 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF143P52747 638 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 VCPP55072 806 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 RAB15P59190 212 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 PSMC1P62191 440 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 RPL7AP62424 266 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 SLC25A11Q02978 314 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF252P-AS1Q0IIN9 211 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 PDCLQ13371 301 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 SLC29A2Q14542 456 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 MORF4L2Q15014 288 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 PTGISQ16647 500 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 XKR4Q5GH76 650 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 FAM47CQ5HY64 1035 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 FAM26DQ5JW98 314 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ARHGAP17Q68EM7 881 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 HIBCHQ6NVY1 386 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 C4orf22Q6V702 233 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 C16orf59Q7L2K0 433 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 YTHDF3Q7Z739 585 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 XYLT1Q86Y38 959 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ZCCHC9Q8N567 271 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 C7orf31Q8N865 590 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CMASQ8NFW8 434 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 BCAS4Q8TDM0 211 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 TEKT4Q8WW24 435 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 SNX27Q96L92 541 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CCDC114Q96M63 670 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF560Q96MR9 790 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 TBCBQ99426 244 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CNPY3Q9BT09 278 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 FRMD8Q9BZ67 464 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 PLEKHA4Q9H4M7 779 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CCDC134Q9H6E4 229 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 SYNCQ9H7C4 482 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 RSAD1Q9HA92 442 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 CHST7Q9NS84 486 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 FETUBQ9UGM5 382 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ANAPC5Q9UJX4 755 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 UBQLN1Q9UMX0 589 aaKnown RBP8.86□□□□□ -0.99
VTI1A-207ENST00000489357 AGAP1Q9UPQ3 857 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 ACTL7BQ9Y614 415 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 MYO9BQ13459 2157 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 PDCD11Q14690 1871 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 NDUFAB1O14561 156 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 RASGRF2O14827 1237 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 TP73O15350 636 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 TRAPPC3O43617 180 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 CAND2O75155 1236 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 GPR32O75388 356 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 LRCH4O75427 683 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 MICAL2O94851 1124 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 PARNO95453 639 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 VTNP04004 478 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 KCNE1P15382 129 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 PAX3P23760 479 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 HOXA11P31270 313 aaPredicted RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 STIP1P31948 543 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 CYP2C18P33260 490 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 RFC1P35251 1148 aaPredicted RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 SSR1P43307 286 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 MMP13P45452 471 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 OSTNP61366 133 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 TFDP2Q14188 446 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 STAT4Q14765 748 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 PDK2Q15119 407 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 OASLQ15646 514 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 RASIP1Q5U651 963 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 KCTD16Q68DU8 428 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 TAF2Q6P1X5 1199 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 DENND1BQ6P3S1 775 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 ALKAL1Q6UXT8 129 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 CATSPER4Q7RTX7 472 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 ANKS1BQ7Z6G8 1248 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 MAP7D3Q8IWC1 876 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 CCDC116Q8IYX3 515 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 ALLCQ8N6M5 410 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 SLC35B2Q8TB61 432 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 C1orf54Q8WWF1 131 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 P3H4Q92791 437 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 BADQ92934 168 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 FAM84AQ96KN4 292 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 CFAP57Q96MR6 1250 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 UBE2OQ9C0C9 1292 aaKnown RBP8.85□□□□□ -0.99
VTI1A-207ENST00000489357 ELOVL4Q9GZR5 314 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 SEMA4AQ9H3S1 761 aa8.85□□□□□ -0.99
VTI1A-207ENST00000489357 HIPK3Q9H422 1215 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms