RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 FAM172AQ8WUF8 416 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 CASKIN2Q8WXE0 1202 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 PEBP4Q96S96 227 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 KCNK16Q96T55 309 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 VN1R3Q9BXE9 311 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 DCLK3Q9C098 648 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 PLEKHA4Q9H4M7 779 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.88■□□□□ 0.61
CD40-206ENST00000489304 CXXC1Q9P0U4 656 aaPredicted RBP18.88■□□□□ 0.61
CD40-206ENST00000489304 PCSK1NQ9UHG2 260 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 MRPL42Q9Y6G3 142 aaKnown RBP18.88■□□□□ 0.61
CD40-206ENST00000489304 EFCAB14O75071 495 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 DAB1O75553 588 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 BDNFP23560 247 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 KDELR1P24390 212 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 MATKP42679 507 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 ATP11AP98196 1134 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 MRPL58Q14197 206 aaKnown RBP18.88■□□□□ 0.61
CD40-206ENST00000489304 RAB6CQ53S08 254 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 RTP2Q5QGT7 225 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 SPOUT1Q5T280 376 aaKnown RBP18.88■□□□□ 0.61
CD40-206ENST00000489304 NDRG1Q92597 394 aaKnown RBP18.88■□□□□ 0.61
CD40-206ENST00000489304 SLCO2A1Q92959 643 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 ACSF2Q96CM8 615 aaPredicted RBP18.88■□□□□ 0.61
CD40-206ENST00000489304 FUT8Q9BYC5 575 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 ZCWPW1Q9H0M4 648 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 RAB6CQ9H0N0 254 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 CNGB3Q9NQW8 809 aa18.88■□□□□ 0.61
CD40-206ENST00000489304 PRPSAP2O60256 369 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 TJP3O95049 919 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 CARSP49589 748 aaKnown RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 NDUFV1P49821 464 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 YWHAZP63104 245 aaKnown RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 CUL1Q13616 776 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 BTG3Q14201 252 aaPredicted RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 CDO1Q16878 200 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 SMTNL2Q2TAL5 461 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 BOLA3Q53S33 107 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 KCNT1Q5JUK3 1230 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 RSPO2Q6UXX9 243 aaPredicted RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 C4orf50Q6ZRC1 276 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 GPRIN1Q7Z2K8 1008 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 JAMLQ86YT9 394 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 TEKT4Q8WW24 435 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.87■□□□□ 0.61
CD40-206ENST00000489304 TBCBQ99426 244 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 RAB17Q9H0T7 212 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 PNPLA8Q9NP80 782 aa18.87■□□□□ 0.61
CD40-206ENST00000489304 NGRNQ9NPE2 291 aaKnown RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 DMAP1Q9NPF5 467 aaPredicted RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 R3HDM2Q9Y2K5 976 aaKnown RBP18.87■□□□□ 0.61
CD40-206ENST00000489304 SF3B1O75533 1304 aaKnown RBP eCLIP18.87■□□□□ 0.61
CD40-206ENST00000489304 ESYT3A0FGR9 886 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ENDOD1O94919 500 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 KRT10P13645 584 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ALDH7A1P49419 539 aaKnown RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 HDAC4P56524 1084 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 DAOAP59103 153 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 CCNG2Q16589 344 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 CTXN3Q4LDR2 81 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 SLC39A12Q504Y0 691 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 KCNT2Q6UVM3 1135 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 SCML4Q8N228 414 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 C1orf54Q8WWF1 131 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 SLC2A13Q96QE2 648 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ERP44Q9BS26 406 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ULBP1Q9BZM6 244 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 CHST7Q9NS84 486 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 RASAL2Q9UJF2 1139 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 UTP11Q9Y3A2 253 aaKnown RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 PTPRSQ13332 1948 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 EFEMP2O95967 443 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ARSEP51690 589 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ADCY2Q08462 1091 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 ELAVL2Q12926 359 aaKnown RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 DUPD1Q68J44 220 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 PRSS55Q6UWB4 352 aaPredicted RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 STRADAQ7RTN6 431 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 HDXQ7Z353 690 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 SPATA2LQ8IUW3 424 aaPredicted RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 GSPT2Q8IYD1 628 aaKnown RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 CCDC105Q8IYK2 499 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 CMTR2Q8IYT2 770 aaKnown RBP18.86■□□□□ 0.61
CD40-206ENST00000489304 DEFB106AQ8N104 65 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 KCTD6Q8NC69 237 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 IFT81Q8WYA0 676 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 NT5C3BQ969T7 300 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 IGSF21Q96ID5 467 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 TRIM51Q9BSJ1 452 aa18.86■□□□□ 0.61
CD40-206ENST00000489304 COL4A4P53420 1690 aaPredicted RBP18.85■□□□□ 0.61
CD40-206ENST00000489304 TFE3P19532 575 aaPredicted RBP18.85■□□□□ 0.61
CD40-206ENST00000489304 NOS2P35228 1153 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 ARPP19P56211 112 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 TRADDQ15628 312 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 SLC25A52Q3SY17 297 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 EMBQ6PCB8 327 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 SLC39A11Q8N1S5 342 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 ATG4AQ8WYN0 398 aa18.85■□□□□ 0.61
CD40-206ENST00000489304 IRGQQ8WZA9 623 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms