RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 ZSWIM2Q8NEG5 633 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 AFG1LQ8WV93 481 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 SLCO2A1Q92959 643 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CD101Q93033 1021 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 EXOC4Q96A65 974 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 ZNF653Q96CK0 615 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 RNPC3Q96LT9 517 aaKnown RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PCDHB18PQ96TA0 734 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 C16orf70Q9BSU1 422 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 NUP85Q9BW27 656 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 KATNAL1Q9BW62 490 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 BCO2Q9BYV7 579 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 FRMD8P1Q9BZ68 369 aaPredicted RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 GCOM2Q9BZD3 368 aaPredicted RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CNOT8Q9UFF9 292 aaKnown RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PCYOX1Q9UHG3 505 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 IP6K2Q9UHH9 426 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 ITGA11Q9UKX5 1188 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 NOC2LQ9Y3T9 749 aaKnown RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 A0A1B0GUA9 196 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 MBLAC1A4D2B0 266 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 GOLGA6BA6NDN3 693 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 GOLGA8KD6RF30 607 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 XPOTO43592 962 aaKnown RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 PHF2O75151 1096 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 CELF2O95319 508 aaKnown RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 FGGP02679 453 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 STAG3L1P0CL83 205 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ATF7P17544 494 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 COMTP21964 271 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 MMP8P22894 467 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 PAX3P23760 479 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 MARK3P27448 753 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 RGS2P41220 211 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 TNNT3P45378 269 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 FCGRTP55899 365 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 RBP5P82980 135 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 GUCY2DQ02846 1103 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 CAV1Q03135 178 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 SREBF2Q12772 1141 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 MYO1EQ12965 1108 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 PIGHQ14442 188 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 TERF2Q15554 542 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ZNF699Q32M78 642 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 MAP1SQ66K74 1059 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 TMEM270Q6UE05 265 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 NXPE4Q6UWF7 544 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 LRIG3Q6UXM1 1119 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 DLK2Q6UY11 383 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 MON1BQ7L1V2 547 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 RHOT1Q8IXI2 618 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 OR6J1Q8NGC5 347 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 CCHCR1Q8TD31 782 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 GRK7Q8WTQ7 553 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 KAT5Q92993 513 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ARHGEF26Q96DR7 871 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ZBTB45Q96K62 511 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 NLRP4Q96MN2 994 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ACAP3Q96P50 834 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 RUFY1Q96T51 708 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 KRT12Q99456 494 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ERP44Q9BS26 406 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 FOXP3Q9BZS1 431 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 HAPLN2Q9GZV7 340 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 AP5M1Q9H0R1 490 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 CDT1Q9H211 546 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 RNPEPQ9H4A4 650 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 IFT122Q9HBG6 1241 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 EPB41L5Q9HCM4 733 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 PDGFCQ9NRA1 345 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 TOPORSQ9NS56 1045 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 TAS2R14Q9NYV8 317 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 ADAM22Q9P0K1 906 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 GPN3Q9UHW5 284 aaPredicted RBP7.01□□□□□ -1.29
PDCD4-209ENST00000489049 HPCAL4Q9UM19 191 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 COG5Q9UP83 839 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 EFR3BQ9Y2G0 817 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 TELO2Q9Y4R8 837 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 NUB1Q9Y5A7 615 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 UTRNP46939 3433 aa7.01□□□□□ -1.29
PDCD4-209ENST00000489049 GOLGA6L10A6NI86 522 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 SORBS3O60504 671 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 RNGTTO60942 597 aaKnown RBP7□□□□□ -1.29
PDCD4-209ENST00000489049 LEFTY1O75610 366 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 SEC31AO94979 1220 aaKnown RBP7□□□□□ -1.29
PDCD4-209ENST00000489049 F2P00734 622 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 HMGCRP04035 888 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 MMP3P08254 477 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 SETSIPP0DME0 302 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 DESP17661 470 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 PTPN7P35236 360 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 RDXP35241 583 aaKnown RBP7□□□□□ -1.29
PDCD4-209ENST00000489049 HSPA9P38646 679 aaKnown RBP7□□□□□ -1.29
PDCD4-209ENST00000489049 PNPLA4P41247 253 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 EIF3BP55884 814 aaKnown RBP7□□□□□ -1.29
PDCD4-209ENST00000489049 GSCP56915 257 aaPredicted RBP7□□□□□ -1.29
PDCD4-209ENST00000489049 NOMO3P69849 1222 aa7□□□□□ -1.29
PDCD4-209ENST00000489049 NKX3-2P78367 333 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms