RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ARID3AQ99856 593 aa24.3■■□□□ 1.48
COL9A3-213ENST00000489045 NACA2Q9H009 215 aa24.3■■□□□ 1.48
COL9A3-213ENST00000489045 PNPLA8Q9NP80 782 aa24.3■■□□□ 1.48
COL9A3-213ENST00000489045 CISHQ9NSE2 258 aa24.3■■□□□ 1.48
COL9A3-213ENST00000489045 TBC1D14Q9P2M4 693 aa24.3■■□□□ 1.48
COL9A3-213ENST00000489045 CYP26A1O43174 497 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 IRF1P10914 325 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 ACO1P21399 889 aaKnown RBP24.29■■□□□ 1.48
COL9A3-213ENST00000489045 PPP1R26Q5T8A7 1209 aaPredicted RBP24.29■■□□□ 1.48
COL9A3-213ENST00000489045 RHBDF2Q6PJF5 856 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 CEP68Q76N32 757 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.29■■□□□ 1.48
COL9A3-213ENST00000489045 GPR161Q8N6U8 529 aaKnown RBP24.29■■□□□ 1.48
COL9A3-213ENST00000489045 HHIPQ96QV1 700 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 USP18Q9UMW8 372 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 SCML2Q9UQR0 700 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 SH3BP1Q9Y3L3 701 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 CACNA1AO00555 2505 aa24.29■■□□□ 1.48
COL9A3-213ENST00000489045 ADH1CP00326 375 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 ADH5P11766 374 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 STIM1Q13586 685 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 SYT13Q7L8C5 426 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 ELOA2Q8IYF1 753 aaPredicted RBP24.28■■□□□ 1.48
COL9A3-213ENST00000489045 TTC39CQ8N584 583 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 CAMKK1Q8N5S9 505 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 TATDN2Q93075 761 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 WBP2Q969T9 261 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 ACDQ96AP0 544 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 HEXIM2Q96MH2 286 aaKnown RBP24.28■■□□□ 1.48
COL9A3-213ENST00000489045 PARD6AQ9NPB6 346 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 OSER1Q9NX31 292 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 ARMCX3Q9UH62 379 aaPredicted RBP24.28■■□□□ 1.48
COL9A3-213ENST00000489045 MAN1B1Q9UKM7 699 aa24.28■■□□□ 1.48
COL9A3-213ENST00000489045 CCDC163A0A0D9SF12 145 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 K7EQS6 105 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 PSMA7O14818 248 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 TBX18O95935 607 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 RETP07949 1114 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 CD44P16070 742 aaKnown RBP24.27■■□□□ 1.48
COL9A3-213ENST00000489045 TGM1P22735 817 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 SLC6A11P48066 632 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 SEC13P55735 322 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 DMC1Q14565 340 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 LY6G5CQ5SRR4 150 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 C12orf40Q86WS4 652 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 SLC4A11Q8NBS3 891 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 OTUB2Q96DC9 234 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 DUSP16Q9BY84 665 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 NMUR1Q9HB89 426 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 COQ4Q9Y3A0 265 aa24.27■■□□□ 1.48
COL9A3-213ENST00000489045 ANTXRLA6NF34 631 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 GADD45BO75293 160 aaPredicted RBP24.26■■□□□ 1.47
COL9A3-213ENST00000489045 RAD23BP54727 409 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 SPEM2Q0P670 501 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 BBS7Q8IWZ6 715 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 CCDC26Q8TAB7 109 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 USP33Q8TEY7 942 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 GAB3Q8WWW8 586 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 SLC35C1Q96A29 364 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 TMEM176AQ96HP8 235 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 DHTKD1Q96HY7 919 aaPredicted RBP24.26■■□□□ 1.47
COL9A3-213ENST00000489045 CYLDQ9NQC7 956 aa24.26■■□□□ 1.47
COL9A3-213ENST00000489045 A0A1W2PQH9 124 aa24.25■■□□□ 1.47
COL9A3-213ENST00000489045 RPP40O75818 363 aaKnown RBP24.25■■□□□ 1.47
COL9A3-213ENST00000489045 EIF2DP41214 584 aaKnown RBP24.25■■□□□ 1.47
COL9A3-213ENST00000489045 KIF11P52732 1056 aa24.25■■□□□ 1.47
COL9A3-213ENST00000489045 MESP2Q0VG99 397 aa24.25■■□□□ 1.47
COL9A3-213ENST00000489045 C2orf27AQ580R0 203 aa24.25■■□□□ 1.47
COL9A3-213ENST00000489045 SFTPA1Q8IWL2 248 aa24.25■■□□□ 1.47
COL9A3-213ENST00000489045 FAM160A2Q8N612 972 aaPredicted RBP24.25■■□□□ 1.47
COL9A3-213ENST00000489045 PNKPQ96T60 521 aa24.25■■□□□ 1.47
COL9A3-213ENST00000489045 DUSP9Q99956 384 aaKnown RBP24.25■■□□□ 1.47
COL9A3-213ENST00000489045 KLF16Q9BXK1 252 aaPredicted RBP24.25■■□□□ 1.47
COL9A3-213ENST00000489045 FAM124BQ9H5Z6 455 aaPredicted RBP24.25■■□□□ 1.47
COL9A3-213ENST00000489045 CCDC192P0DO97 292 aa24.24■■□□□ 1.47
COL9A3-213ENST00000489045 RARGP13631 454 aa24.24■■□□□ 1.47
COL9A3-213ENST00000489045 ATP5C1P36542 298 aaKnown RBP24.24■■□□□ 1.47
COL9A3-213ENST00000489045 GAD2Q05329 585 aa24.24■■□□□ 1.47
COL9A3-213ENST00000489045 KDSRQ06136 332 aa24.24■■□□□ 1.47
COL9A3-213ENST00000489045 CUL2Q13617 745 aa24.24■■□□□ 1.47
COL9A3-213ENST00000489045 RSPO4Q2I0M5 234 aaPredicted RBP24.24■■□□□ 1.47
COL9A3-213ENST00000489045 KLHL10Q6JEL2 608 aa24.24■■□□□ 1.47
COL9A3-213ENST00000489045 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.24■■□□□ 1.47
COL9A3-213ENST00000489045 DNAH14Q0VDD8 3507 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 SDK1Q7Z5N4 2213 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 AXIN1O15169 862 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 KAT7O95251 611 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 APBB3O95704 486 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 APODP05090 189 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 BMP6P22004 513 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 PPP1R2P41236 205 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 LMNB2Q03252 620 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 ARHGAP17Q68EM7 881 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 ERMP1Q7Z2K6 904 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 CCDC186Q7Z3E2 898 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 SCD5Q86SK9 330 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 CEP63Q96MT8 703 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 METTL14Q9HCE5 456 aaKnown RBP24.23■■□□□ 1.47
COL9A3-213ENST00000489045 ARHGEF4Q9NR80 690 aa24.23■■□□□ 1.47
COL9A3-213ENST00000489045 SPHK2Q9NRA0 654 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms