RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HTR7P34969 479 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 PRIM2P49643 509 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 MTHFSP49914 203 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 CASP5P51878 434 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 DEUP1Q05D60 604 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 SUPT20HL1Q3ZLR7 823 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 AWAT1Q58HT5 328 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 SFTPA1Q8IWL2 248 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 LINC01465Q8N7H1 131 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 ASB2Q96Q27 587 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 QTRT1Q9BXR0 403 aaKnown RBP4.43□□□□□ -1.7
RFC4-213ENST00000489028 FAM83DQ9H4H8 585 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 HPSEQ9Y251 543 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 SLC27A6Q9Y2P4 619 aa4.43□□□□□ -1.7
RFC4-213ENST00000489028 POM121BA6NF01 834 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 M0R3H8 397 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 TRIM27P14373 513 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 CREB1P16220 341 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 SFPQP23246 707 aaKnown RBP eCLIP4.42□□□□□ -1.7
RFC4-213ENST00000489028 EPHB2P29323 1055 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 COPAP53621 1224 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 SUMO2P61956 95 aaKnown RBP4.42□□□□□ -1.7
RFC4-213ENST00000489028 CATSPERGQ6ZRH7 1159 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 RNF44Q7L0R7 432 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 IQCDQ96DY2 449 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 HIST1H2AAQ96QV6 131 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 TBCBQ99426 244 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 NAA15Q9BXJ9 866 aaKnown RBP4.42□□□□□ -1.7
RFC4-213ENST00000489028 PNPLA8Q9NP80 782 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 TRIM36Q9NQ86 728 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 PDGFCQ9NRA1 345 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 DNAJB11Q9UBS4 358 aa4.42□□□□□ -1.7
RFC4-213ENST00000489028 WDR91A4D1P6 747 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 POC1B-GALNT4F8VUJ3 575 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 INO80B-WBP1J3KQ70 363 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 FOXN3O00409 490 aaPredicted RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 INMTO95050 263 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 PRR35P0CG20 571 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 CYP2A6P11509 494 aaPredicted RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 GNALP38405 381 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 COPB1P53618 953 aaKnown RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 SSBP2P81877 361 aaPredicted RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 ZNF626Q68DY1 528 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 CLEC9AQ6UXN8 241 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 SERPINA13PQ6UXR4 307 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 YTHDF3Q7Z739 585 aaKnown RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 RAB11FIP4Q86YS3 637 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 SDR16C5Q8N3Y7 309 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 GALNT4Q8N4A0 578 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 ATP11CQ8NB49 1132 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 IPCEF1Q8WWN9 437 aaPredicted RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 ZNF668Q96K58 619 aaPredicted RBP4.41□□□□□ -1.7
RFC4-213ENST00000489028 ZNF778Q96MU6 729 aa4.41□□□□□ -1.7
RFC4-213ENST00000489028 A0A1W2PPC4 97 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 PPP6CO00743 305 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 KIF3BO15066 747 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 MYL3P08590 195 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 ARP10275 920 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 ATF7P17544 494 aaPredicted RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 FGFR2P21802 821 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 RBL1P28749 1068 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 ATICP31939 592 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 MTAPQ13126 283 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 SAFBQ15424 915 aaKnown RBP eCLIP4.4□□□□□ -1.71
RFC4-213ENST00000489028 EZH2Q15910 746 aaKnown RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 SRSF7Q16629 238 aaKnown RBP eCLIP4.4□□□□□ -1.71
RFC4-213ENST00000489028 FAM187BQ17R55 369 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 MTX3Q5HYI7 312 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 GRHL2Q6ISB3 625 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 CRTC1Q6UUV9 634 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 KRT28Q7Z3Y7 464 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 NEK8Q86SG6 692 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 CCDC33Q8N5R6 958 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 PJA1Q8NG27 643 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 SMCR8Q8TEV9 937 aaPredicted RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 EDC3Q96F86 508 aaKnown RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 LRRC46Q96FV0 321 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 ZDHHC12Q96GR4 267 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 KAZALD1Q96I82 304 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 FAM227BQ96M60 508 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 HEYLQ9NQ87 328 aaPredicted RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 MYO1AQ9UBC5 1043 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 MGAT4CQ9UBM8 478 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 ZNF70Q9UC06 446 aaPredicted RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 SETD1BQ9UPS6 1966 aaKnown RBP4.4□□□□□ -1.71
RFC4-213ENST00000489028 COL15A1P39059 1388 aa4.4□□□□□ -1.71
RFC4-213ENST00000489028 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 CLCA1A8K7I4 914 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 A8MVJ9 347 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 THAP12O43422 761 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 CA12O43570 354 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 NCK2O43639 380 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 MT-CO3P00414 261 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 TUBB4AP04350 444 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 CHRM5P08912 532 aaPredicted RBP4.39□□□□□ -1.71
RFC4-213ENST00000489028 YY1P25490 414 aa4.39□□□□□ -1.71
RFC4-213ENST00000489028 CERS1P27544 350 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms