RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 PDILTQ8N807 584 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 TERB1Q8NA31 727 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 PDZD8Q8NEN9 1154 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 CEP76Q8TAP6 659 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 OTUB2Q96DC9 234 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 ERLEC1Q96DZ1 483 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 ACOX2Q99424 681 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 CGRRF1Q99675 332 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
YIPF3-207ENST00000488966 XYLT2Q9H1B5 865 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 CCSER2Q9H7U1 834 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 KIAA1586Q9HCI6 787 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 CD248Q9HCU0 757 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 SPHK2Q9NRA0 654 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 GMIPQ9P107 970 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 NXF1Q9UBU9 619 aaKnown RBP11.44□□□□□ -0.58
YIPF3-207ENST00000488966 SH3BP1Q9Y3L3 701 aa11.44□□□□□ -0.58
YIPF3-207ENST00000488966 ASCC3Q8N3C0 2202 aaKnown RBP11.44□□□□□ -0.58
YIPF3-207ENST00000488966 IGHV1OR15-9A0A0B4J2B8 117 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 FAM221BA6H8Z2 402 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 A8MXQ7 604 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 ARHGAP33O14559 1287 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 OPHN1O60890 802 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 RTN3O95197 1032 aaPredicted RBP11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CAPNS1P04632 268 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 IRF1P10914 325 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 NTSR1P30989 418 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CYP2J2P51589 502 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CDH8P55286 799 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 MYL6P60660 151 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CYP24A1Q07973 514 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 PSMD6Q15008 389 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 ACAP1Q15027 740 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 SNX30Q5VWJ9 437 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 PAQR9Q6ZVX9 377 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 EPM2AIP1Q7L775 607 aaPredicted RBP11.43□□□□□ -0.58
YIPF3-207ENST00000488966 TRMT11Q7Z4G4 463 aaKnown RBP11.43□□□□□ -0.58
YIPF3-207ENST00000488966 TRIML1Q8N9V2 468 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
YIPF3-207ENST00000488966 OVCA2Q8WZ82 227 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 HSPA12BQ96MM6 686 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CAMK1GQ96NX5 476 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CD93Q9NPY3 652 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 IL37Q9NZH6 218 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 ATRXP46100 2492 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 ZZEF1O43149 2961 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 PTPRDP23468 1912 aa11.43□□□□□ -0.58
YIPF3-207ENST00000488966 CACNA1EQ15878 2313 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 H0Y626 953 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 CLIC2O15247 247 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 TRIM16O95361 564 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 STAU1O95793 577 aaKnown RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 ZDHHC11BP0C7U3 371 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 NDUFV2P19404 249 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 TUBP50607 506 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 SLC5A3P53794 718 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 TRPC3Q13507 836 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 ZNF423Q2M1K9 1284 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 PREPLQ4J6C6 727 aaPredicted RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 GRAMD4Q6IC98 578 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 RAB44Q7Z6P3 723 aaPredicted RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 FAM35AQ86V20 835 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 CHPFQ8IZ52 775 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 ZNF507Q8TCN5 953 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 ELMO3Q96BJ8 720 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 USP28Q96RU2 1077 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 DUSP9Q99956 384 aaKnown RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 MED10Q9BTT4 135 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 SLC6A17Q9H1V8 727 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 DMAP1Q9NPF5 467 aaPredicted RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 DNAAF2Q9NVR5 837 aaKnown RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 CYP8B1Q9UNU6 501 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 RAD54BQ9Y620 910 aa11.42□□□□□ -0.58
YIPF3-207ENST00000488966 HELZP42694 1942 aaKnown RBP11.42□□□□□ -0.58
YIPF3-207ENST00000488966 ZFYVE26Q68DK2 2539 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 A0A1W2PQD8 194 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 FAM92AA1XBS5 289 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 PRRT4C9JH25 899 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 EIF3DO15371 548 aaKnown RBP eCLIP11.41□□□□□ -0.58
YIPF3-207ENST00000488966 ZBTB24O43167 697 aaPredicted RBP11.41□□□□□ -0.58
YIPF3-207ENST00000488966 SH3BP5O60239 455 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 CACNG3O60359 315 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 GREM1O60565 184 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 ZNF217O75362 1048 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 GJB3O75712 270 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 SYPP08247 313 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 RDXP35241 583 aaKnown RBP11.41□□□□□ -0.58
YIPF3-207ENST00000488966 CASP4P49662 377 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 CUL4AQ13619 759 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 SLC39A14Q15043 492 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 E2F4Q16254 413 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 FAM26FQ5R3K3 315 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 TOGARAM2Q6ZUX3 1019 aa11.41□□□□□ -0.58
YIPF3-207ENST00000488966 NUDT18Q6ZVK8 323 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms