RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RRAGBQ5VZM2 374 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CD276Q5ZPR3 534 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 INO80CQ6PI98 192 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CPLX2Q6PUV4 134 aaKnown RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 PCSK4Q6UW60 755 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 Q6ZVL8 140 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 LCA5Q86VQ0 697 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 CCDC117Q8IWD4 279 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 OR8H3Q8N146 312 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 TMEM57Q8N5G2 664 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 LSM14AQ8ND56 463 aaKnown RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 HIPK4Q8NE63 616 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 GOT1L1Q8NHS2 421 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MGARPQ8TDB4 240 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 ZCCHC14Q8WYQ9 949 aaKnown RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 RAB24Q969Q5 203 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 ZSWIM3Q96MP5 696 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MUC13Q9H3R2 512 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 TSPY26PQ9H489 355 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MANSC1Q9H8J5 431 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 BRF2Q9HAW0 419 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 NOD2Q9HC29 1040 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 AURKAIP1Q9NWT8 199 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 PLA2G3Q9NZ20 509 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 MORF4L1Q9UBU8 362 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 ZNF212Q9UDV6 495 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 XPO7Q9UIA9 1087 aaKnown RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 AJAP1Q9UKB5 411 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 USP18Q9UMW8 372 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 TMEM5Q9Y2B1 443 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 ATP6V0A2Q9Y487 856 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 USP15Q9Y4E8 981 aaPredicted RBP3.74□□□□□ -1.81
PRPF4-203ENST00000488937 DMRT1Q9Y5R6 373 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 PSAT1Q9Y617 370 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 PIAS3Q9Y6X2 628 aa3.74□□□□□ -1.81
PRPF4-203ENST00000488937 A0A0A6YYK5 440 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 PRAMEF22A3QJZ6 481 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 VWA3AA6NCI4 1184 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 OR2W5A6NFC9 320 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ZNF839A8K0R7 811 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 AP3D1O14617 1153 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 NRP2O60462 931 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TBCAO75347 108 aaKnown RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SLC22A3O75751 556 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TSPAN9O75954 239 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 NTSR2O95665 410 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 AHSGP02765 367 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 MT-ND3P03897 115 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 AMY1AP04745 511 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 P4HA1P13674 534 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 STMN1P16949 149 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 IFNAR1P17181 557 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 RXRAP19793 462 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TBXAS1P24557 533 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 IL1R2P27930 398 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ABCD1P33897 745 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 PSMC2P35998 433 aaKnown RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 PSMB10P40306 273 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 MSH2P43246 934 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 PHKA1P46020 1223 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 MCM2P49736 904 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ALDH3A2P51648 485 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 RAD23AP54725 363 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 RBP5P82980 135 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SCAPQ12770 1279 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TFCP2Q12800 502 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 BFSP1Q12934 665 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 STK4Q13043 487 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 CHAF1BQ13112 559 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 CTBP1Q13363 440 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 MAMLD1Q13495 774 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 RAB32Q13637 225 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 NOLC1Q14978 699 aaKnown RBP eCLIP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TBCEQ15813 527 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TBCCQ15814 346 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 KYNUQ16719 465 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SLC5A9Q2M3M2 681 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 MST1LQ2TV78 715 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 MMEL1Q495T6 779 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 C5orf22Q49AR2 442 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ABRAXAS1Q6UWZ7 409 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 FAM47EQ6ZV65 393 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 DNAJB7Q7Z6W7 309 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 C1orf210Q8IVY1 113 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 GLB1L2Q8IW92 636 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 OR56A3Q8NH54 315 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 CSGALNACT1Q8TDX6 532 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ZNF483Q8TF39 744 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 USP6NLQ92738 828 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 EXTL1Q92935 676 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 CYFIP2Q96F07 1278 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ZNF845Q96IR2 970 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 GNRHR2Q96P88 292 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 PLEKHG4BQ96PX9 1271 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 TRAPPC9Q96Q05 1148 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 FUZQ9BT04 418 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SOX7Q9BT81 388 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 USP44Q9H0E7 712 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SIL1Q9H173 461 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms