RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 FEZF2Q8TBJ5 459 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 C9orf72Q96LT7 481 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 RBM15Q96T37 977 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL16A1-215ENST00000488897 CHST12Q9NRB3 414 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 PARVAQ9NVD7 372 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 EURLQ9NYK6 297 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 KLHL14Q9P2G3 628 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 IP6K2Q9UHH9 426 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 NT5C1B-RDH14C9J2C7 533 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 PTGESO14684 152 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 IL9RQ01113 521 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 RCOR2Q8IZ40 523 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 CXorf56Q9H5V9 222 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 RPF1Q9H9Y2 349 aaKnown RBP19.15■□□□□ 0.66
COL16A1-215ENST00000488897 TUBGCP4Q9UGJ1 667 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 USTQ9Y2C2 406 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-215ENST00000488897 LCHNA4D1U4 455 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 FOXO6A8MYZ6 492 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 PPEF2O14830 753 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 TBXAS1P24557 533 aaPredicted RBP19.14■□□□□ 0.66
COL16A1-215ENST00000488897 TFAMQ00059 246 aaKnown RBP19.14■□□□□ 0.66
COL16A1-215ENST00000488897 E2F5Q15329 346 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 P3H1Q32P28 736 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 RNF43Q68DV7 783 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 SPOPLQ6IQ16 392 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 TMEM270Q6UE05 265 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 PASD1Q8IV76 773 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 HASPINQ8TF76 798 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 RBM41Q96IZ5 413 aaKnown RBP19.14■□□□□ 0.66
COL16A1-215ENST00000488897 TTC25Q96NG3 672 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 UBN1Q9NPG3 1134 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 GGT7Q9UJ14 662 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 PCDHB7Q9Y5E2 793 aa19.14■□□□□ 0.66
COL16A1-215ENST00000488897 PTPRSQ13332 1948 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 RASA4BC9J798 803 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 RASA4O43374 803 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 VNN1O95497 513 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 LDHAP00338 332 aaKnown RBP19.14■□□□□ 0.65
COL16A1-215ENST00000488897 CD58P19256 250 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 DRICH1Q6PGQ1 229 aaPredicted RBP19.14■□□□□ 0.65
COL16A1-215ENST00000488897 CRIPAKQ8N1N5 446 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 KCNN1Q92952 543 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 KLHL29Q96CT2 875 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 FAM118BQ9BPY3 351 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 UBE2OQ9C0C9 1292 aaKnown RBP19.14■□□□□ 0.65
COL16A1-215ENST00000488897 DNAJB4Q9UDY4 337 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 LRFN2Q9ULH4 789 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 CNTN6Q9UQ52 1028 aa19.14■□□□□ 0.65
COL16A1-215ENST00000488897 FAM47DPA6NHR8 397 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 ARHGEF15O94989 841 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 GRM5P41594 1212 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 CHRDL2Q6WN34 429 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 MAML1Q92585 1016 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 MTMR12Q9C0I1 747 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 RSAD1Q9HA92 442 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 SMIM28A0A1B0GU29 152 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 CASTOR2A6NHX0 329 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 DNALI1O14645 258 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-215ENST00000488897 DDHD2O94830 711 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 TJP3O95049 919 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 CFHP08603 1231 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 GJC1P36383 396 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 PBX2P40425 430 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 ZKSCAN8Q15776 578 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-215ENST00000488897 RBBP8NLQ8NC74 664 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-215ENST00000488897 FTHL17Q9BXU8 183 aa19.13■□□□□ 0.65
COL16A1-215ENST00000488897 APOBEC3GQ9HC16 384 aaKnown RBP19.13■□□□□ 0.65
COL16A1-215ENST00000488897 CITO14578 2027 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 TBKBP1A7MCY6 615 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 NDC80O14777 642 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 LIASO43766 372 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 CST3P01034 146 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-215ENST00000488897 TAC1P20366 129 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 KCNJ2P63252 427 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 FAM189BP81408 668 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 CCDC15Q0P6D6 951 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 TMED2Q15363 201 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 DCAF4L1Q3SXM0 396 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 ANKS1BQ7Z6G8 1248 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 TDRPQ86YL5 185 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 FITM2Q8N6M3 262 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 APBB2Q92870 758 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 KIF12Q96FN5 646 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 PITPNM3Q9BZ71 974 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 SAYSD1Q9NPB0 183 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 TRANK1O15050 2925 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 COL6A3P12111 3177 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 EXOC1LA0A1B0GW35 172 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 ALADP13716 330 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 SKIV2L2P42285 1042 aaKnown RBP19.12■□□□□ 0.65
COL16A1-215ENST00000488897 TOP1MTQ969P6 601 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 SNX27Q96L92 541 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 ARHGEF3Q9NR81 526 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 ZNF148Q9UQR1 794 aa19.12■□□□□ 0.65
COL16A1-215ENST00000488897 DRG1Q9Y295 367 aaKnown RBP19.12■□□□□ 0.65
COL16A1-215ENST00000488897 MYO9BQ13459 2157 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ELF1P32519 619 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 RFC2P35250 354 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 SLC18A1P54219 525 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms