RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TRIM66O15016 1216 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 PAFAH1B1P43034 410 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 EPHB3P54753 998 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 BPIFB4P59827 614 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 PLD1Q13393 1074 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 STILQ15468 1287 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 ALKBH5Q6P6C2 394 aaKnown RBP20.37■□□□□ 0.85
CCM2-216ENST00000488727 GPR149Q86SP6 731 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 NOP9Q86U38 636 aaKnown RBP20.37■□□□□ 0.85
CCM2-216ENST00000488727 SPATA4Q8NEY3 305 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 OLIG1Q8TAK6 271 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 DDX1Q92499 740 aaKnown RBP20.37■□□□□ 0.85
CCM2-216ENST00000488727 SMG7Q92540 1137 aaKnown RBP20.37■□□□□ 0.85
CCM2-216ENST00000488727 ADAM7Q9H2U9 754 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 HCFC1R1Q9NWW0 138 aa20.37■□□□□ 0.85
CCM2-216ENST00000488727 NOCTQ9UK39 431 aaKnown RBP20.37■□□□□ 0.85
CCM2-216ENST00000488727 GRID2IPA4D2P6 1211 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 M0QYV0 167 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 TULP2O00295 520 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 POU2F2P09086 479 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 CCDC172P0C7W6 258 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 PDE4CQ08493 712 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 MTMR3Q13615 1198 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 TERF2Q15554 542 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 CCDC181Q5TID7 509 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 PSMG2Q969U7 264 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 SPATA17Q96L03 361 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 SYT11Q9BT88 431 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 ST7Q9NRC1 585 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 DNMT3BQ9UBC3 853 aaKnown RBP20.36■□□□□ 0.85
CCM2-216ENST00000488727 HESX1Q9UBX0 185 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 CD207Q9UJ71 328 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 HHLA1C9JL84 531 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 DDX3XO00571 662 aaKnown RBP eCLIP20.36■□□□□ 0.851e-10■■■□□ 15
CCM2-216ENST00000488727 MED7O43513 233 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 XYLBO75191 536 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 PDE6CP51160 858 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 BCAT1P54687 386 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 DENND1BQ6P3S1 775 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 SLC30A5Q8TAD4 765 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 SLC20A1Q8WUM9 679 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 COG5Q9UP83 839 aa20.36■□□□□ 0.85
CCM2-216ENST00000488727 TNFRSF10BO14763 440 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 H2AFZP0C0S5 128 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 HMGA1P17096 107 aaKnown RBP20.35■□□□□ 0.85
CCM2-216ENST00000488727 TFF2Q03403 129 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 BST2Q10589 180 aaKnown RBP20.35■□□□□ 0.85
CCM2-216ENST00000488727 VEPH1Q14D04 833 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 TAF3Q5VWG9 929 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 H2AFVQ71UI9 128 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 GPRIN1Q7Z2K8 1008 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 DNAJB7Q7Z6W7 309 aaPredicted RBP20.35■□□□□ 0.85
CCM2-216ENST00000488727 VIPAS39Q9H9C1 493 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 PCDHGC3Q9UN70 934 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 DENND4AQ7Z401 1863 aa20.35■□□□□ 0.85
CCM2-216ENST00000488727 SLC38A8A6NNN8 435 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 OAS2P29728 719 aaKnown RBP20.34■□□□□ 0.85
CCM2-216ENST00000488727 GPD2P43304 727 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 USP46P62068 366 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 NTHL1P78549 312 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 GPS2Q13227 327 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 CASP8Q14790 479 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 GRASPQ7Z6J2 395 aaPredicted RBP20.34■□□□□ 0.85
CCM2-216ENST00000488727 PIGZQ86VD9 579 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 HS6ST3Q8IZP7 471 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 ELMOD1Q8N336 334 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 SLC35F5Q8WV83 523 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 ZNF512Q96ME7 567 aaPredicted RBP20.34■□□□□ 0.85
CCM2-216ENST00000488727 CORO1BQ9BR76 489 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 LRRC3Q9BY71 257 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 PIDD1Q9HB75 910 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 ZNF334Q9HCZ1 680 aaPredicted RBP20.34■□□□□ 0.85
CCM2-216ENST00000488727 ASB3Q9Y575 518 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 OBSL1O75147 1896 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 MYO16Q9Y6X6 1858 aa20.34■□□□□ 0.85
CCM2-216ENST00000488727 NCANO14594 1321 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 GRXCR2A6NFK2 248 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 XPO1O14980 1071 aaKnown RBP20.33■□□□□ 0.85
CCM2-216ENST00000488727 MMEP08473 750 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 SETSIPP0DME0 302 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 CHRNB2P17787 502 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 SLC5A3P53794 718 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 GLE1Q53GS7 698 aaKnown RBP20.33■□□□□ 0.85
CCM2-216ENST00000488727 CES5AQ6NT32 575 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 DENND5BQ6ZUT9 1274 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 ITIH5Q86UX2 942 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 TMC8Q8IU68 726 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 PASD1Q8IV76 773 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 LRRC57Q8N9N7 239 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 SCAMP5Q8TAC9 235 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 CEP295NLQ96MC4 621 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 PNPLA8Q9NP80 782 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 CYTH4Q9UIA0 394 aa20.33■□□□□ 0.85
CCM2-216ENST00000488727 USP15Q9Y4E8 981 aaPredicted RBP20.33■□□□□ 0.85
CCM2-216ENST00000488727 NRG2O14511 850 aaPredicted RBP20.33■□□□□ 0.84
CCM2-216ENST00000488727 FTCDO95954 541 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 RHOP08100 348 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 CSH1P0DML2 217 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 CSH2P0DML3 217 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 PTPN2P17706 415 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms