RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 MORC2Q9Y6X9 1032 aaPredicted RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 ATXN2Q99700 1313 aaKnown RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 TCRBV21S2A2A0A5A6 115 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 CLDN5O00501 218 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 TGFB1I1O43294 461 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 COCHO43405 550 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 ABL1P00519 1130 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 MBL2P11226 248 aaPredicted RBP12.07□□□□□ -0.48
SNU13-208ENST00000488571 ITPKAP23677 461 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 TNFRSF4P43489 277 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 MAPK8P45983 427 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 IFRD2Q12894 506 aaPredicted RBP12.07□□□□□ -0.48
SNU13-208ENST00000488571 LMAN2Q12907 356 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 SNRNP35Q16560 246 aaKnown RBP12.07□□□□□ -0.48
SNU13-208ENST00000488571 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 SLC23A3Q6PIS1 610 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 EPM2AIP1Q7L775 607 aaPredicted RBP12.07□□□□□ -0.48
SNU13-208ENST00000488571 PIP4P1Q86T03 277 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 DDX42Q86XP3 938 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNU13-208ENST00000488571 CCDC65Q8IXS2 484 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 PDILTQ8N807 584 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 OR6B3Q8NGW1 331 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 ZNF516Q92618 1163 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 WBP2Q969T9 261 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 SLITRK1Q96PX8 696 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 ELOVL4Q9GZR5 314 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 SNX25Q9H3E2 840 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 BCCIPQ9P287 314 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNU13-208ENST00000488571 TBC1D14Q9P2M4 693 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 PILRBQ9UKJ0 227 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 ZFYVE26Q68DK2 2539 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 GON4LQ3T8J9 2241 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 PCNX2A6NKB5 2137 aa12.07□□□□□ -0.48
SNU13-208ENST00000488571 E2F8A0AVK6 867 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 SRRM3A6NNA2 597 aaPredicted RBP12.06□□□□□ -0.48
SNU13-208ENST00000488571 HYAL3O43820 417 aaPredicted RBP12.06□□□□□ -0.48
SNU13-208ENST00000488571 TULP3O75386 442 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 FAM163BP0C2L3 166 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 DLATP10515 647 aaKnown RBP12.06□□□□□ -0.48
SNU13-208ENST00000488571 YWHAQP27348 245 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 SEMA3BQ13214 749 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 PSMD6Q15008 389 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 SLC39A14Q15043 492 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 WDR72Q3MJ13 1102 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 LYSMD4Q5XG99 296 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 KIAA1211LQ6NV74 962 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 MIB1Q86YT6 1006 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 NUP93Q8N1F7 819 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 B3GALNT2Q8NCR0 500 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 SCAMP5Q8TAC9 235 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 OTUB2Q96DC9 234 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 USP28Q96RU2 1077 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 KCNK16Q96T55 309 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 CGRRF1Q99675 332 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 TRIM9Q9C026 710 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 XYLT2Q9H1B5 865 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 KIAA1586Q9HCI6 787 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 FSCN3Q9NQT6 498 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 AGPAT3Q9NRZ7 376 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 KLK13Q9UKR3 277 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 PKD1L2Q7Z442 2459 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 CACNA1EQ15878 2313 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 BAHCC1Q9P281 2608 aa12.06□□□□□ -0.48
SNU13-208ENST00000488571 DMXL2Q8TDJ6 3036 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 SPAARA0A1B0GVQ0 90 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 A8MXQ7 604 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 UPK3BL1B0FP48 263 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 UPK3BL2E5RIL1 263 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 TRIM24O15164 1050 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 EIF3DO15371 548 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNU13-208ENST00000488571 HOXC11O43248 304 aaPredicted RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 STAU1O95793 577 aaKnown RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 ZDHHC11BP0C7U3 371 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 GABRG2P18507 467 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 TNNI1P19237 187 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 PDCP20941 246 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 SYT1P21579 422 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 HOXD12P35452 270 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 MYL6P60660 151 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 TNNC1P63316 161 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 GAD2Q05329 585 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 CYP24A1Q07973 514 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 BYSLQ13895 437 aaKnown RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 PAQR9Q6ZVX9 377 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 STXBP4Q6ZWJ1 553 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 BBS7Q8IWZ6 715 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 ZNF513Q8N8E2 541 aaPredicted RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 NAT16Q8N8M0 369 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 PDZD8Q8NEN9 1154 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 ZNF507Q8TCN5 953 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 OVCA2Q8WZ82 227 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 FBXO32Q969P5 355 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
SNU13-208ENST00000488571 TNMDQ9H2S6 317 aa12.05□□□□□ -0.48
SNU13-208ENST00000488571 SLC32A1Q9H598 525 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms