RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SCYL2Q6P3W7 929 aa21.14■□□□□ 0.97
NECAB3-213ENST00000488489 KCTD6Q8NC69 237 aa21.14■□□□□ 0.97
NECAB3-213ENST00000488489 CENPIQ92674 756 aaPredicted RBP21.14■□□□□ 0.97
NECAB3-213ENST00000488489 ZNF333Q96JL9 665 aa21.14■□□□□ 0.97
NECAB3-213ENST00000488489 LRRC4Q9HBW1 653 aa21.14■□□□□ 0.97
NECAB3-213ENST00000488489 HCSTQ9UBK5 93 aa21.14■□□□□ 0.97
NECAB3-213ENST00000488489 PRPSAP2O60256 369 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 OPA1O60313 960 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 TYMPP19971 482 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 PTPN9P43378 593 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 RPL21P46778 160 aaKnown RBP21.13■□□□□ 0.97
NECAB3-213ENST00000488489 DRG2P55039 364 aaKnown RBP21.13■□□□□ 0.97
NECAB3-213ENST00000488489 NNTQ13423 1086 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 EFHC1Q5JVL4 640 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.13■□□□□ 0.974e-7■■■■■ 58.1
NECAB3-213ENST00000488489 DDX23Q9BUQ8 820 aaKnown RBP21.13■□□□□ 0.97
NECAB3-213ENST00000488489 HOMER3Q9NSC5 361 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.13■□□□□ 0.97
NECAB3-213ENST00000488489 GRHL1Q9NZI5 618 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 PCDHB8Q9UN66 801 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 TANC1Q9C0D5 1861 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 DCDC2CA8MYV0 355 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 HHLA1C9JL84 531 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 TMEM189-UBE2V1I3L0A0 370 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 NRP1O14786 923 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 ENDOD1O94919 500 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 CXCL10P02778 98 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 KRT17Q04695 432 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 ALS2CLQ60I27 953 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 ABI1Q8IZP0 508 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 ATL2Q8NHH9 583 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 APBB2Q92870 758 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 HAUS1Q96CS2 278 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 SMARCD1Q96GM5 515 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 FAM193BQ96PV7 902 aaPredicted RBP21.13■□□□□ 0.97
NECAB3-213ENST00000488489 NRDE2Q9H7Z3 1164 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 CSNK1G1Q9HCP0 422 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 ZDHHC18Q9NUE0 388 aa21.13■□□□□ 0.97
NECAB3-213ENST00000488489 SAE1Q9UBE0 346 aaPredicted RBP21.13■□□□□ 0.97
NECAB3-213ENST00000488489 BDNFP23560 247 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 MAGEA9P43362 315 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 ARSEP51690 589 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 CORO7P57737 925 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 YWHAHQ04917 246 aaPredicted RBP21.12■□□□□ 0.97
NECAB3-213ENST00000488489 RAB41Q5JT25 222 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 HFE2Q6ZVN8 426 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 CTU1Q7Z7A3 348 aaKnown RBP21.12■□□□□ 0.97
NECAB3-213ENST00000488489 DEFB128Q7Z7B8 93 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 DEFB106AQ8N104 65 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 SIX6OS1Q8N1H7 587 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 FAM149B1Q96BN6 582 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 TOX2Q96NM4 488 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.12■□□□□ 0.97
NECAB3-213ENST00000488489 DNPEPQ9ULA0 475 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 EFR3BQ9Y2G0 817 aa21.12■□□□□ 0.97
NECAB3-213ENST00000488489 LIASO43766 372 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 HSF2BPO75031 334 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 MATKP42679 507 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 YWHAZP63104 245 aaKnown RBP21.11■□□□□ 0.97
NECAB3-213ENST00000488489 DYNLT1P63172 113 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 MMRN1Q13201 1228 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 PPP1R7Q15435 360 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 ZC3H12AQ5D1E8 599 aaKnown RBP21.11■□□□□ 0.97
NECAB3-213ENST00000488489 ZDHHC24Q6UX98 284 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 THEM5Q8N1Q8 247 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 CALN1Q9BXU9 219 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 ULBP1Q9BZM6 244 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 GPATCH2LQ9NWQ4 482 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 NEU2Q9Y3R4 380 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 CST8O60676 142 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 CDH6P55285 790 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 BCAR1P56945 870 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 PITX1P78337 314 aaPredicted RBP21.11■□□□□ 0.97
NECAB3-213ENST00000488489 CCDC114Q96M63 670 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 TBCBQ99426 244 aa21.11■□□□□ 0.97
NECAB3-213ENST00000488489 PTPRDP23468 1912 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 IRAK1P51617 712 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 PLTPP55058 493 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 TRIP13Q15645 432 aaPredicted RBP21.1■□□□□ 0.97
NECAB3-213ENST00000488489 CA9Q16790 459 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 BOLA3Q53S33 107 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 DNAJC21Q5F1R6 531 aaKnown RBP21.1■□□□□ 0.97
NECAB3-213ENST00000488489 FBXO25Q8TCJ0 367 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 VWCEQ96DN2 955 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 SNRNP25Q9BV90 132 aaKnown RBP21.1■□□□□ 0.97
NECAB3-213ENST00000488489 LRFN2Q9ULH4 789 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 NLRC5Q86WI3 1866 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 VWA8A3KMH1 1905 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 YJEFN3A6XGL0 299 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 E7ENQ6 273 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 TP73O15350 636 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 FYNP06241 537 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 OR4Q2P0C623 313 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 IL4RP24394 825 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 BYSLQ13895 437 aaKnown RBP21.1■□□□□ 0.97
NECAB3-213ENST00000488489 DPYSL3Q14195 570 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 DCAF6Q58WW2 860 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 C1orf53Q5VUE5 145 aa21.1■□□□□ 0.97
NECAB3-213ENST00000488489 OTUD1Q5VV17 481 aaPredicted RBP21.1■□□□□ 0.97
NECAB3-213ENST00000488489 SYPL2Q5VXT5 272 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms