RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 SLC35F5Q8WV83 523 aa16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 ZFRQ96KR1 1074 aaKnown RBP16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 DDX23Q9BUQ8 820 aaKnown RBP16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 KCNH6Q9H252 994 aa16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 CYLDQ9NQC7 956 aa16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 SMPD4Q9NXE4 827 aa16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 CPQQ9Y646 472 aa16.85■□□□□ 0.29
ERGIC3-216ENST00000488384 LEFTY2O00292 366 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 FOXN3O00409 490 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 EPHB6O15197 1021 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 THAP12O43422 761 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 TLR5O60602 858 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 GABBR2O75899 941 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 MBL2P11226 248 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 STARD6P59095 220 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 RAPGEF1Q13905 1077 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 DRAP1Q14919 205 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 MEA1Q16626 185 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 PMF1Q6P1K2 205 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 TPRG1Q6ZUI0 275 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 BHLHA9Q7RTU4 235 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 SUGP1Q8IWZ8 645 aaKnown RBP16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 FAM71AQ8IYT1 594 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 FLCNQ8NFG4 579 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 ZNF606Q8WXB4 792 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 KCTD13Q8WZ19 329 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 FAM83CQ9BQN1 747 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 ULBP1Q9BZM6 244 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 LRRC4Q9HBW1 653 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 CBX8Q9HC52 389 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 HPS4Q9NQG7 708 aa16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 THG1LQ9NWX6 298 aaKnown RBP16.84■□□□□ 0.29
ERGIC3-216ENST00000488384 F8VZ95 297 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 TBX18O95935 607 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 ZBED1O96006 694 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 PSEN1P49768 467 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 RGS7P49802 495 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 TNK2Q07912 1038 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 TCF15Q12870 199 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 SYCP1Q15431 976 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 TRIM68Q6AZZ1 485 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 PM20D1Q6GTS8 502 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 ASTLQ6HA08 431 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 TMEM105Q8N8V8 129 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 TTC16Q8NEE8 873 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 SHDQ96IW2 340 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 PHOX2BQ99453 314 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 GKN1Q9NS71 199 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 FAM207AQ9NSI2 230 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 GTSE1Q9NYZ3 720 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 CLIC5Q9NZA1 410 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 NAGPAQ9UK23 515 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 WNT6Q9Y6F9 365 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 PIAS3Q9Y6X2 628 aa16.83■□□□□ 0.28
ERGIC3-216ENST00000488384 MED7O43513 233 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 RARGP13631 454 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 ARSAP15289 507 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 AOC1P19801 751 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 CLCN1P35523 988 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 GPD2P43304 727 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 SOX9P48436 509 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 UBXN1Q04323 297 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 LUZP1Q86V48 1076 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 SLC47A2Q86VL8 602 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 SIX6OS1Q8N1H7 587 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 CSGALNACT1Q8TDX6 532 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 OSCP1Q8WVF1 389 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 NDRG1Q92597 394 aaKnown RBP16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 ERGIC2Q96RQ1 377 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 FOXQ1Q9C009 403 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 EBF3Q9H4W6 596 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 CFAP97Q9P2B7 532 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 CYTH4Q9UIA0 394 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 NUDT5Q9UKK9 219 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 F5P12259 2224 aa16.82■□□□□ 0.28
ERGIC3-216ENST00000488384 CACNA1HO95180 2353 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 KANSL1LA0AUZ9 987 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 PIK3R2O00459 728 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 SCAMP3O14828 347 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 MDM4O15151 490 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 PI15O43692 258 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 LCP1P13796 627 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 CD72P21854 359 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 RPL34P49207 117 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 CLCN5P51795 746 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 DAOAP59103 153 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 PTK2Q05397 1052 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 PDGFRLQ15198 375 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 KLHDC10Q6PID8 442 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 DDX42Q86XP3 938 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 SCML4Q8N228 414 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 ARHGAP18Q8N392 663 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 TTC8Q8TAM2 541 aa16.81■□□□□ 0.28
ERGIC3-216ENST00000488384 WBP2Q969T9 261 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms