RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 NFRKBQ6P4R8 1299 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 MAATS1Q7Z4T9 603 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 LRRTM4Q86VH4 590 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 ZNF276Q8N554 614 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 PPHLN1Q8NEY8 458 aaKnown RBP5.4□□□□□ -1.54
SRRM1-215ENST00000488317 TOR1AIP2Q8NFQ8 470 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 SUN3Q8TAQ9 357 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 HMGB4Q8WW32 186 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 CPT1BQ92523 772 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 GLG1Q92896 1179 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 PTCD3Q96EY7 689 aaKnown RBP5.4□□□□□ -1.54
SRRM1-215ENST00000488317 PPM1MQ96MI6 270 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 COG8Q96MW5 612 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 HAPLN3Q96S86 360 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 SEC62Q99442 399 aaKnown RBP5.4□□□□□ -1.54
SRRM1-215ENST00000488317 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 BDH2Q9BUT1 245 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 DPCDQ9BVM2 203 aaPredicted RBP5.4□□□□□ -1.54
SRRM1-215ENST00000488317 VN1R3Q9BXE9 311 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 VPS16Q9H269 839 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 FSCN3Q9NQT6 498 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 TMEM74BQ9NUR3 256 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 GGA3Q9NZ52 723 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 STEAP1Q9UHE8 339 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 GJD2Q9UKL4 321 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 DAPP1Q9UN19 280 aa5.4□□□□□ -1.54
SRRM1-215ENST00000488317 C19orf53Q9UNZ5 99 aaPredicted RBP5.4□□□□□ -1.54
SRRM1-215ENST00000488317 UNC13AQ9UPW8 1703 aa5.4□□□□□ -1.55
SRRM1-215ENST00000488317 SMARCA4P51532 1647 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 E7EVH7 732 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 J3KRW8 73 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 EYA2O00167 538 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 CER1O95813 267 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 PRKCBP05771 671 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 CENPBP07199 599 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 JUPP14923 745 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 LAG3P18627 525 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 DRD1P21728 446 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 SELENOPP49908 381 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 TIRAPP58753 221 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 ACTR2P61160 394 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 ZNF569Q5MCW4 686 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 INTS11Q5TA45 600 aaKnown RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 CAND1Q86VP6 1230 aaKnown RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 RAB11FIP4Q86YS3 637 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 ESX1Q8N693 406 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 ASB12Q8WXK4 309 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 MAELQ96JY0 434 aaKnown RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 GPR20Q99678 358 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 TTPALQ9BTX7 342 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 CHODLQ9H9P2 273 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 CD248Q9HCU0 757 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 TBCCD1Q9NVR7 557 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 PARPBPQ9NWS1 579 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 NKX1-2Q9UD57 310 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 TESQ9UGI8 421 aaKnown RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 CCNL1Q9UK58 526 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-215ENST00000488317 RIMKLBQ9ULI2 386 aa5.39□□□□□ -1.55
SRRM1-215ENST00000488317 A1L4Q6 167 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 MARCH11A6NNE9 402 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 KIF28PB7ZC32 967 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 SLC16A3O15427 465 aaKnown RBP5.38□□□□□ -1.55
SRRM1-215ENST00000488317 RPP40O75818 363 aaKnown RBP5.38□□□□□ -1.55
SRRM1-215ENST00000488317 WDR47O94967 919 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 TNFAIP3P21580 790 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 BMPR1AP36894 532 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 PBX1P40424 430 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.551e-9■■■■■ 32.3
SRRM1-215ENST00000488317 RBM5P52756 815 aaKnown RBP eCLIP5.38□□□□□ -1.55
SRRM1-215ENST00000488317 GEMIN4P57678 1058 aaKnown RBP5.38□□□□□ -1.55
SRRM1-215ENST00000488317 ADAM17P78536 824 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 GUCY1B3Q02153 619 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 ITIH3Q06033 890 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 TRPC3Q13507 836 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 FHL3Q13643 280 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 SF3B3Q15393 1217 aaKnown RBP5.38□□□□□ -1.55
SRRM1-215ENST00000488317 TBCCQ15814 346 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 TIGD2Q4W5G0 525 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 TMEM196Q5HYL7 178 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 RSRC2Q7L4I2 434 aaKnown RBP5.38□□□□□ -1.55
SRRM1-215ENST00000488317 KRT27Q7Z3Y8 459 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 DTX2Q86UW9 622 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 HERC6Q8IVU3 1022 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 C1orf210Q8IVY1 113 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 TMEM57Q8N5G2 664 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 CEP70Q8NHQ1 597 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 XAGE5Q8WWM1 108 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 LPIN2Q92539 896 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 FKBP10Q96AY3 582 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 SKA1Q96BD8 255 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 SDCCAG3Q96C92 435 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 R3HDM4Q96D70 268 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 SLC26A6Q9BXS9 759 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 NDUFAF4Q9P032 175 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 CNTN6Q9UQ52 1028 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 COL15A1P39059 1388 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 CECR2Q9BXF3 1484 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 SMARCA2P51531 1590 aa5.38□□□□□ -1.55
SRRM1-215ENST00000488317 KIF21BO75037 1637 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms