RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ARID3BQ8IVW6 561 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 SCUBE3Q8IX30 993 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 ARL14EPQ8N8R7 260 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 SYN2Q92777 582 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 E2F7Q96AV8 911 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 ASB16Q96NS5 453 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 CYP2S1Q96SQ9 504 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 CDK5RAP1Q96SZ6 601 aaKnown RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 IGSF9Q9P2J2 1179 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 NOCTQ9UK39 431 aaKnown RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 DENND4CQ5VZ89 1909 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 E5RJQ4 531 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 NRG2O14511 850 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-219ENST00000488186 MBL2P11226 248 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-219ENST00000488186 RARGP13631 454 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 TDRD12Q587J7 1177 aaKnown RBP16.52■□□□□ 0.24
C9orf3-219ENST00000488186 SNX30Q5VWJ9 437 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 NAA35Q5VZE5 725 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 PM20D1Q6GTS8 502 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 OR6B2Q6IFH4 312 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 PARM1Q6UWI2 310 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 TMEM110Q86TL2 294 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 YAF2Q8IY57 180 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 WDTC1Q8N5D0 677 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 ST13P5Q8NFI4 369 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-219ENST00000488186 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 RNF139Q8WU17 664 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 CPA5Q8WXQ8 436 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 IRGQQ8WZA9 623 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 FAM149B1Q96BN6 582 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 MRFAP1L1Q96HT8 127 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 HAUS4Q9H6D7 363 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 KCNK12Q9HB15 430 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 TDP1Q9NUW8 608 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 NUMBLQ9Y6R0 609 aa16.52■□□□□ 0.24
C9orf3-219ENST00000488186 GREB1Q4ZG55 1949 aa16.52■□□□□ 0.23
C9orf3-219ENST00000488186 TRIOO75962 3097 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 TLR5O60602 858 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 SERPING1P05155 500 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 ZDHHC11BP0C7U3 371 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 SKILP12757 684 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 CHRNB2P17787 502 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 ATP5C1P36542 298 aaKnown RBP16.51■□□□□ 0.23
C9orf3-219ENST00000488186 VIPR2P41587 438 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 NSFP46459 744 aaKnown RBP16.51■□□□□ 0.23
C9orf3-219ENST00000488186 TUBP50607 506 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 DAOAP59103 153 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 FMO1Q01740 532 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 C10orf120Q5SQS8 335 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 TANGO2Q6ICL3 276 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 SCML4Q8N228 414 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 CELF5Q8N6W0 485 aaKnown RBP16.51■□□□□ 0.23
C9orf3-219ENST00000488186 NDRG1Q92597 394 aaKnown RBP16.51■□□□□ 0.23
C9orf3-219ENST00000488186 ELSPBP1Q96BH3 223 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 KXD1Q9BQD3 176 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.23
C9orf3-219ENST00000488186 TRIM62Q9BVG3 475 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 CCSER2Q9H7U1 834 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 THG1LQ9NWX6 298 aaKnown RBP16.51■□□□□ 0.23
C9orf3-219ENST00000488186 CLIC5Q9NZA1 410 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 CYTH4Q9UIA0 394 aa16.51■□□□□ 0.23
C9orf3-219ENST00000488186 FAM170AA1A519 330 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 GOLGA6L3A6NEY3 463 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 AKR1B15C9JRZ8 316 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-219ENST00000488186 ANHXE9PGG2 379 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 CAPN9O14815 690 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 DCXO43602 365 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 ECI2O75521 394 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 ASGR2P07307 311 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 WEE1P30291 646 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-219ENST00000488186 GOLGA8FQ08AF8 430 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 GOLGA8DPQ0D2H9 430 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 HTR4Q13639 388 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 BSPRYQ5W0U4 402 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 CC2D1AQ6P1N0 951 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-219ENST00000488186 CNGA4Q8IV77 575 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 RSAD2Q8WXG1 361 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 FGF14Q92915 247 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 C18orf8Q96DM3 657 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 CPXM1Q96SM3 734 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 RNF38Q9H0F5 515 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 SMG9Q9H0W8 520 aaKnown RBP16.5■□□□□ 0.23
C9orf3-219ENST00000488186 KIF9Q9HAQ2 790 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 NMUR1Q9HB89 426 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 TRPV4Q9HBA0 871 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 ABCC13Q9NSE7 274 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
C9orf3-219ENST00000488186 YJEFN3A6XGL0 299 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 HEPACAM2A8MVW5 462 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 E7ENQ6 273 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 COCHO43405 550 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 ADCY5O95622 1261 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 OAS1P00973 400 aaKnown RBP16.49■□□□□ 0.23
C9orf3-219ENST00000488186 LTFP02788 710 aa16.49■□□□□ 0.23
C9orf3-219ENST00000488186 CYP1A1P04798 512 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms