RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 WHAMMQ8TF30 809 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 OVCA2Q8WZ82 227 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 TATDN2Q93075 761 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 HNRNPABQ99729 332 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 NIF3L1Q9GZT8 377 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 INVSQ9Y283 1065 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 TPRP12270 2363 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 PLXND1Q9Y4D7 1925 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 MED19A0JLT2 244 aaPredicted RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 DCLK1O15075 740 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 CYP26A1O43174 497 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 TLR5O60602 858 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 CILPO75339 1184 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 RPP40O75818 363 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ZDHHC11BP0C7U3 371 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ADH5P11766 374 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 TRIM21P19474 475 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 HOXA6P31267 233 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 TIE1P35590 1138 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 DGKEP52429 567 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 PMS1P54277 932 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 NUCB2P80303 420 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 INCA1Q0VD86 236 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 PPP1R26Q5T8A7 1209 aaPredicted RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ZNF658Q5TYW1 1059 aaPredicted RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 EMC10Q5UCC4 262 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ANKRD40Q6AI12 368 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 SYT13Q7L8C5 426 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ERMP1Q7Z2K6 904 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 DDX42Q86XP3 938 aaKnown RBP eCLIP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ENGASEQ8NFI3 743 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 GAB3Q8WWW8 586 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ACDQ96AP0 544 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 HEXIM2Q96MH2 286 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 TSG101Q99816 390 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ARID3AQ99856 593 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 TPSD1Q9BZJ3 242 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 ARRDC1-AS1Q9H2J1 176 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 FBXO44Q9H4M3 255 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 CYP3A43Q9HB55 503 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 TLR8Q9NR97 1041 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 SEMA4GQ9NTN9 838 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 RMND1Q9NWS8 449 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 OSER1Q9NX31 292 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 IL37Q9NZH6 218 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
NIPAL3-207ENST00000488155 A0A1W2PQH9 124 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 E2F8A0AVK6 867 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 DCDC2BA2VCK2 349 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 HHLA1C9JL84 531 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 GDF9O60383 454 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 KAT7O95251 611 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 ADH1CP00326 375 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 APODP05090 189 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 LMNB2Q03252 620 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 LRMPQ12912 555 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 ANO4Q32M45 955 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 SNX30Q5VWJ9 437 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 CACNA2D4Q7Z3S7 1137 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 CAMKK1Q8N5S9 505 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 TSTD1Q8NFU3 115 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 PNKPQ96T60 521 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 SMOC1Q9H4F8 434 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 NMUR1Q9HB89 426 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 ARHGEF4Q9NR80 690 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 COMMD8Q9NX08 183 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 TBC1D14Q9P2M4 693 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 PCNX2A6NKB5 2137 aa11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-207ENST00000488155 NUMA1Q14980 2115 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 FAM92AA1XBS5 289 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 PRR5-ARHGAP8B1AHC4 643 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 TRIM24O15164 1050 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 SMC2O95347 1197 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 KLF8O95600 359 aaPredicted RBP11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 APBB3O95704 486 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 RARGP13631 454 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 HNRNPLP14866 589 aaKnown RBP eCLIP11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 GBP1P32455 592 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 GTF2H1P32780 548 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 ARHGAP8P85298 464 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 FOXK2Q01167 660 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 GAD2Q05329 585 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 SF3A2Q15428 464 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 CBWD6Q4V339 395 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 CBWD3Q5JTY5 395 aa11.92□□□□□ -0.5
NIPAL3-207ENST00000488155 CBWD5Q5RIA9 395 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms