RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ZDHHC11BP0C7U3 371 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 ITPKAP23677 461 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 ATICP31939 592 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 MAPK8P45983 427 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 SLC5A3P53794 718 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 UNC13DQ70J99 1090 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 FAM35AQ86V20 835 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 DDX42Q86XP3 938 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRRT-212ENST00000487311 SYT12Q8IV01 421 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 FUKQ8N0W3 1084 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 PGBD3Q8N328 593 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 IQUBQ8NA54 791 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 KDF1Q8NAX2 398 aaPredicted RBP17.17■□□□□ 0.34
SRRT-212ENST00000487311 OVCA2Q8WZ82 227 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 ERLEC1Q96DZ1 483 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 SMOQ99835 787 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 SCNM1Q9BWG6 230 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 SPHK2Q9NRA0 654 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 GMIPQ9P107 970 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 BCCIPQ9P287 314 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRRT-212ENST00000487311 PILRBQ9UKJ0 227 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 PCNX2A6NKB5 2137 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 PI4KAP42356 2102 aa17.17■□□□□ 0.34
SRRT-212ENST00000487311 FAM92AA1XBS5 289 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
SRRT-212ENST00000487311 PHACTR2O75167 634 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 VNN1O95497 513 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 TBX18O95935 607 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 IRF1P10914 325 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 ENGP17813 658 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 GABRG2P18507 467 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 WASP42768 502 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 SNRPFP62306 86 aaKnown RBP17.16■□□□□ 0.34
SRRT-212ENST00000487311 ORC1Q13415 861 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 CUL4BQ13620 913 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 ACOT1Q86TX2 421 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 C12orf56Q8IXR9 622 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 PDZD8Q8NEN9 1154 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 PARD3BQ8TEW8 1205 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
SRRT-212ENST00000487311 ACOX2Q99424 681 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 MED10Q9BTT4 135 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 VRTNQ9H8Y1 702 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 SH3BP1Q9Y3L3 701 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 CHD6Q8TD26 2715 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 ZZEF1O43149 2961 aa17.16■□□□□ 0.34
SRRT-212ENST00000487311 A0A1W2PQF6 199 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 LRRIQ3A6PVS8 624 aaPredicted RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 HOXC11O43248 304 aaPredicted RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 CUTAO60888 179 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 CCDC130P13994 396 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 CLDN10P78369 228 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 KNOP1Q1ED39 458 aaKnown RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 BMT2Q1RMZ1 405 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 ANO4Q32M45 955 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 SLC23A3Q6PIS1 610 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 SCARA5Q6ZMJ2 495 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 ZNF513Q8N8E2 541 aaPredicted RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 GATA6Q92908 595 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 OTUB2Q96DC9 234 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 SPACA7Q96KW9 195 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 NUSAP1Q9BXS6 441 aaKnown RBP17.15■□□□□ 0.34
SRRT-212ENST00000487311 ADAM33Q9BZ11 813 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 CD248Q9HCU0 757 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 OSER1Q9NX31 292 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 DEC1Q9P2X7 70 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 ADAMTS9Q9P2N4 1935 aa17.15■□□□□ 0.34
SRRT-212ENST00000487311 EXOC3O60645 756 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 AP1G2O75843 785 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 AFMP43652 599 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 DLG4P78352 724 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 LMAN2Q12907 356 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 NCOA4Q13772 614 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 SPDYCQ5MJ68 293 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 PEAR1Q5VY43 1037 aaPredicted RBP17.14■□□□□ 0.33
SRRT-212ENST00000487311 LYSMD4Q5XG99 296 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 BTBD8Q5XKL5 378 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 EGFLAMQ63HQ2 1017 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 KIAA1211LQ6NV74 962 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 GRAMD1CQ8IYS0 662 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 C12orf29Q8N999 325 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 TERB1Q8NA31 727 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 P2RY11Q96G91 374 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 SMARCD1Q96GM5 515 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 KLF16Q9BXK1 252 aaPredicted RBP17.14■□□□□ 0.33
SRRT-212ENST00000487311 DMAP1Q9NPF5 467 aaPredicted RBP17.14■□□□□ 0.33
SRRT-212ENST00000487311 KRT82Q9NSB4 513 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 HMGXB4Q9UGU5 601 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 UBE4BO95155 1302 aa17.14■□□□□ 0.33
SRRT-212ENST00000487311 CEP192Q8TEP8 1941 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 SPAARA0A1B0GVQ0 90 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 PRRT4C9JH25 899 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 TUBP50607 506 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 MAP3K7CLP57077 242 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 FAM193AP78312 1265 aa17.13■□□□□ 0.33
SRRT-212ENST00000487311 SEMA3BQ13214 749 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms