RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 KRT4P19013 534 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 ZBTB6Q15916 424 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 KIZQ2M2Z5 673 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 PKDCCQ504Y2 493 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 NOTUMQ6P988 496 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 ZDHHC17Q8IUH5 632 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 PALM2Q8IXS6 379 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 SPOCK2Q92563 424 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 INPP5DQ92835 1189 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 PEBP4Q96S96 227 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 HESX1Q9UBX0 185 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 XPO7Q9UIA9 1087 aaKnown RBP27.21■■□□□ 1.95
HLA-C-208ENST00000487245 SPAG6O75602 509 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 HOXA11P31270 313 aaPredicted RBP27.2■■□□□ 1.94
HLA-C-208ENST00000487245 PSMC4P43686 418 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 ROR1Q01973 937 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 E2F5Q15329 346 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 TAF5Q15542 800 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 SESTD1Q86VW0 696 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 BANPQ8N9N5 519 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 SPATA18Q8TC71 538 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 TMEM237Q96Q45 408 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 LRRC37BQ96QE4 947 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 TBCBQ99426 244 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 PARK7Q99497 189 aaKnown RBP27.2■■□□□ 1.94
HLA-C-208ENST00000487245 DNAI2Q9GZS0 605 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 C10orf88Q9H8K7 445 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 SLCO1B3Q9NPD5 702 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 SETD4Q9NVD3 440 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 GEMIN8Q9NWZ8 242 aaKnown RBP27.2■■□□□ 1.94
HLA-C-208ENST00000487245 SNTG2Q9NY99 539 aa27.2■■□□□ 1.94
HLA-C-208ENST00000487245 TCRBV7S3A2A0A539 114 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 SLC15A5A6NIM6 579 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 AXLP30530 894 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 SLC6A3Q01959 620 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 IRF5Q13568 498 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 EFTUD2Q15029 972 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■■■■■ 38.1
HLA-C-208ENST00000487245 TLDC1Q6P9B6 456 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 TMEM110Q86TL2 294 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 AGGF1Q8N302 714 aaeCLIP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 KIF2BQ8N4N8 673 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 AGAP11Q8TF27 550 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 TSPAN18Q96SJ8 248 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 CYTH2Q99418 400 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 VPS11Q9H270 941 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 SNX9Q9Y5X1 595 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 NRCAMQ92823 1304 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 SMIM35A0A1B0GVV1 85 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 FKBP1BP68106 108 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 KRT81Q14533 505 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 PPP1R26Q5T8A7 1209 aaPredicted RBP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 ARHGAP17Q68EM7 881 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 DARS2Q6PI48 645 aaKnown RBP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 CYP4V2Q6ZWL3 525 aaPredicted RBP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 ZNF276Q8N554 614 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 FAM71DQ8N9W8 422 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 RNF157Q96PX1 679 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 FRMD8Q9BZ67 464 aaPredicted RBP27.19■■□□□ 1.94
HLA-C-208ENST00000487245 ZNF408Q9H9D4 720 aa27.19■■□□□ 1.94
HLA-C-208ENST00000487245 C2CD2LO14523 706 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 GPR32O75388 356 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 KCNJ11Q14654 390 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 FAM110CQ1W6H9 321 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 BBS9Q3SYG4 887 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 CCDC14Q49A88 953 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 SLC45A4Q5BKX6 768 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 TRNP1Q6NT89 227 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 OTOAQ7RTW8 1153 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 C12orf29Q8N999 325 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 ERP27Q96DN0 273 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 MRPL45Q9BRJ2 306 aaKnown RBP27.18■■□□□ 1.94
HLA-C-208ENST00000487245 PNPLA8Q9NP80 782 aa27.18■■□□□ 1.94
HLA-C-208ENST00000487245 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.18■■□□□ 1.94
HLA-C-208ENST00000487245 CHADO15335 359 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 FAM155BO75949 473 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 OLFML1Q6UWY5 402 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 ACOT1Q86TX2 421 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 GIMAP7Q8NHV1 300 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 SLC35F5Q8WV83 523 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 ETNK1Q9HBU6 452 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 CNTN3Q9P232 1028 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 TRIM33Q9UPN9 1127 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 CLEC11AQ9Y240 323 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 CFAP69A5D8W1 941 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 ZNF487B1APH4 448 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 CAPN15O75808 1086 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 TGM2P21980 687 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 SDC4P31431 198 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 C15orf59Q2T9L4 293 aaPredicted RBP27.17■■□□□ 1.94
HLA-C-208ENST00000487245 PMF1Q6P1K2 205 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 RTP4Q96DX8 246 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 UBQLN1Q9UMX0 589 aaKnown RBP27.17■■□□□ 1.94
HLA-C-208ENST00000487245 TEX264Q9Y6I9 313 aa27.17■■□□□ 1.94
HLA-C-208ENST00000487245 IQANK1A0A1B0GTG1 560 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 A6NJR5 290 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 FGFR1P11362 822 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 RGS7P49802 495 aa27.16■■□□□ 1.94
HLA-C-208ENST00000487245 SH3PXD2AQ5TCZ1 1133 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms