RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 FSTL1Q12841 308 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 SLC5A9Q2M3M2 681 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 ZNF750Q32MQ0 723 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 ADCK5Q3MIX3 580 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 ZIK1Q3SY52 487 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-216ENST00000487043 MRNIPQ6NTE8 343 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-216ENST00000487043 SPATA31D4Q6ZUB0 917 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 KRT73Q86Y46 540 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 C2CD5Q86YS7 1000 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 D2HGDHQ8N465 521 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 SLC16A11Q8NCK7 471 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 CHST13Q8NET6 341 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 MDGA1Q8NFP4 955 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 PPP2R3CQ969Q6 453 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 SKA1Q96BD8 255 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 LRIG1Q96JA1 1093 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 PPM1MQ96MI6 270 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 PNKPQ96T60 521 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 SLC46A2Q9BY10 475 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 SMOC2Q9H3U7 446 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 MSL2Q9HCI7 577 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 GGA3Q9NZ52 723 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 VSX1Q9NZR4 365 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-216ENST00000487043 DNMT3BQ9UBC3 853 aaKnown RBP4.62□□□□□ -1.67
PTCD3-216ENST00000487043 HPSEQ9Y251 543 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 MRPS17Q9Y2R5 130 aaKnown RBP4.62□□□□□ -1.67
PTCD3-216ENST00000487043 CDY1Q9Y6F8 540 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 EIF3AQ14152 1382 aaKnown RBP4.62□□□□□ -1.67
PTCD3-216ENST00000487043 CCDC7Q96M83 1385 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 PLEKHG1Q9ULL1 1385 aa4.62□□□□□ -1.67
PTCD3-216ENST00000487043 CEP170BQ9Y4F5 1589 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 B9A039 149 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 SRGAP2O75044 1071 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ACTL6BO94805 426 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 RHOBTB3O94955 611 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 BDNFP23560 247 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 YY1P25490 414 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 MST1P26927 711 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 LRPAP1P30533 357 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 PXNP49023 591 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 PNLIPRP1P54315 467 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 PRKAG1P54619 331 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ALDH18A1P54886 795 aaKnown RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 POLE2P56282 527 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 LOXL3P58215 753 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 AP2B1P63010 937 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 TMF1P82094 1093 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 NHLH2Q02577 135 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 NSUN2Q08J23 767 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 FOXD4Q12950 439 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 FOXL1Q12952 345 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 PTCHD3Q3KNS1 767 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 FBXO47Q5MNV8 452 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 INTS11Q5TA45 600 aaKnown RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 TMEM108Q6UXF1 575 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 RASGRP3Q8IV61 690 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 POC1BQ8TC44 478 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 CPT1CQ8TCG5 803 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 AFG1LQ8WV93 481 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ASB12Q8WXK4 309 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 GRAMD1AQ96CP6 724 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 RBM15Q96T37 977 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 SEC62Q99442 399 aaKnown RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 NEU1Q99519 415 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 PYM1Q9BRP8 204 aaKnown RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 MEGF9Q9H1U4 602 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 SLC25A32Q9H2D1 315 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 FAM83DQ9H4H8 585 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 TAF1DQ9H5J8 278 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ZBTB26Q9HCK0 441 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 SAYSD1Q9NPB0 183 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 RIC8AQ9NPQ8 531 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 TMOD4Q9NZQ9 345 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 HSFX1Q9UBD0 423 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 LPAR3Q9UBY5 353 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 GJD2Q9UKL4 321 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 USP15Q9Y4E8 981 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 DTNAQ9Y4J8 743 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 KIF7Q2M1P5 1343 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 CENPJQ9HC77 1338 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ABCC11Q96J66 1382 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ADAMTS13Q76LX8 1427 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 YTHDC2Q9H6S0 1430 aaKnown RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 MED14O60244 1454 aa4.61□□□□□ -1.67
PTCD3-216ENST00000487043 ZNF142P52746 1687 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-216ENST00000487043 POLR1AO95602 1720 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-216ENST00000487043 CCDC78A2IDD5 438 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 LEFTY2O00292 366 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 TOR1BO14657 336 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 PCDH17O14917 1159 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 CCNT2O60583 730 aaKnown RBP4.6□□□□□ -1.67
PTCD3-216ENST00000487043 ERN1O75460 977 aaKnown RBP4.6□□□□□ -1.67
PTCD3-216ENST00000487043 GLP2RO95838 553 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 PLATP00750 562 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 ZNF20P17024 532 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 KCNA3P22001 575 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 KLRK1P26718 216 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 AKT1P31749 480 aa4.6□□□□□ -1.67
PTCD3-216ENST00000487043 ADD2P35612 726 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms