RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 PBX4Q9BYU1 374 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 TRIM7Q9C029 511 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 VANGL2Q9ULK5 521 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 NAALADL1Q9UQQ1 740 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 ALG6Q9Y672 507 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 COMMD10Q9Y6G5 202 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 BRWD1Q9NSI6 2320 aa5.59□□□□□ -1.51
RAB3GAP1-204ENST00000487003 A0A1W2PQJ5 194 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 PIRO00625 290 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TRIM66O15016 1216 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 COL6A1P12109 1028 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ATP5C1P36542 298 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 RECQLP46063 649 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 KPNA1P52294 538 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TBX4P57082 545 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CCZ1BP86790 482 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CCZ1P86791 482 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CKAP4Q07065 602 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 AP1B1Q10567 949 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CDH18Q13634 790 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CFAP221Q4G0U5 840 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 PTPN20Q4JDL3 420 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 FAM182AQ5T1J6 154 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 HECTD3Q5T447 861 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 DNAJB7Q7Z6W7 309 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 DENND1CQ8IV53 801 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 LNX1Q8TBB1 728 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CELF6Q96J87 481 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 STRA6Q9BX79 667 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 DUSP16Q9BY84 665 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ELAC1Q9H777 363 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CRTAC1Q9NQ79 661 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 GKN1Q9NS71 199 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 DNAJC17Q9NVM6 304 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TTC7AQ9ULT0 858 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 YIPF1Q9Y548 306 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TET1Q8NFU7 2136 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ZSWIM8A7E2V4 1837 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 FAM47DPA6NHR8 397 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 NEMP1O14524 444 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ZMYND10O75800 440 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TRUB2O95900 331 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ATXN8OSP0DMR3 200 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 NEFHP12036 1026 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 KRT10P13645 584 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 EPHB1P54762 984 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 MARSP56192 900 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 YWHAGP61981 247 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 DSC3Q14574 896 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 NFIL3Q16649 462 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 C10orf76Q5T2E6 689 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 PPP1R2P3Q6NXS1 205 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 RHOT1Q8IXI2 618 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 FUKQ8N0W3 1084 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 JOSD2Q8TAC2 188 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 UHMK1Q8TAS1 419 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 C1orf54Q8WWF1 131 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 EPAS1Q99814 870 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 XYLT2Q9H1B5 865 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 BCCIPQ9P287 314 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 COLQQ9Y215 455 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CCDC78A2IDD5 438 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 MTMR11A4FU01 709 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 EEF2KO00418 725 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 B4GALT3O60512 393 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 RTN3O95197 1032 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 GTF2F1P35269 517 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 NNMTP40261 264 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 SLC11A2P49281 568 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 BASP1P80723 227 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 SLC6A3Q01959 620 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CALCOCO2Q13137 446 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TCTN1Q2MV58 587 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ATP13A4Q4VNC1 1196 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 FAM26DQ5JW98 314 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 RAP1GAP2Q684P5 730 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 C8orf74Q6P047 294 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 MRPL10Q7Z7H8 261 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 LRRTM3Q86VH5 581 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 CFAP52Q8N1V2 620 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 SLC43A3Q8NBI5 491 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 FLCNQ8NFG4 579 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ZNF461Q8TAF7 563 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 AGAP3Q96P47 875 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 KRT12Q99456 494 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 DNAJC7Q99615 494 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TMEM175Q9BSA9 504 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 SP110Q9HB58 689 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 SIX2Q9NPC8 291 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 PPANQ9NQ55 473 aaKnown RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 TMLHEQ9NVH6 421 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 ARGLU1Q9NWB6 273 aaPredicted RBP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 AIPL1Q9NZN9 384 aa5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAB3GAP1-204ENST00000487003 PTPRFP10586 1907 aa5.57□□□□□ -1.52
RAB3GAP1-204ENST00000487003 WDR27A2RRH5 827 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms