RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 C16orf70Q9BSU1 422 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 LRMDAQ9H2I8 198 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 EBF2Q9HAK2 575 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 RAB6BQ9NRW1 208 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 KCNN4O15554 427 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 GABBR2O75899 941 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 MT-ND3P03897 115 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 RBL1P28749 1068 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 SEPT7Q16181 437 aaKnown RBP12.84□□□□□ -0.35
PTCD2-204ENST00000486995 CA9Q16790 459 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
PTCD2-204ENST00000486995 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
PTCD2-204ENST00000486995 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 PCDH19Q8TAB3 1148 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 PTPRN2Q92932 1015 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 STAMBPL1Q96FJ0 436 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 MRPL45Q9BRJ2 306 aaKnown RBP12.84□□□□□ -0.35
PTCD2-204ENST00000486995 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 PCDH18Q9HCL0 1135 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 PAK5Q9P286 719 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 HAO1Q9UJM8 370 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
PTCD2-204ENST00000486995 IQANK1A0A1B0GTG1 560 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 C2CD2LO14523 706 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 ETV4P43268 484 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SLC18A2Q05940 514 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 STILQ15468 1287 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SLC9A4Q6AI14 798 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 TMEM110Q86TL2 294 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 ACOT1Q86TX2 421 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 FAM172AQ8WUF8 416 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SLC35F5Q8WV83 523 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 TEKT4Q8WW24 435 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 TMEM237Q96Q45 408 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 NCAPGQ9BPX3 1015 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 MANSC1Q9H8J5 431 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 PNPLA8Q9NP80 782 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 NPHS2Q9NP85 383 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 KANSL3Q9P2N6 904 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 HEY1Q9Y5J3 304 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 APOL1O14791 398 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 PPEF2O14830 753 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 LPXNO60711 386 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 TGM2P21980 687 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 GRM5P41594 1212 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 NEK3P51956 506 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 BCAR1P56945 870 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SLC6A3Q01959 620 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 TTLL12Q14166 644 aaPredicted RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 PARP6Q2NL67 630 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 ZNF792Q3KQV3 632 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 MARCH8Q5T0T0 291 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 NLRP9Q7RTR0 991 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 CCDC125Q86Z20 511 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 USP6NLQ92738 828 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SLC7A6OSQ96CW6 309 aaPredicted RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 TACO1Q9BSH4 297 aaKnown RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 SNRNP25Q9BV90 132 aaKnown RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
PTCD2-204ENST00000486995 NUMBLQ9Y6R0 609 aa12.83□□□□□ -0.36
PTCD2-204ENST00000486995 BCLAF3A2AJT9 711 aaKnown RBP12.82□□□□□ -0.36
PTCD2-204ENST00000486995 PAPSS1O43252 624 aaPredicted RBP12.82□□□□□ -0.36
PTCD2-204ENST00000486995 SPAG6O75602 509 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 MAP3K6O95382 1288 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 CYP2C8P10632 490 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 CCND1P24385 295 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 CAND1Q86VP6 1230 aaKnown RBP12.82□□□□□ -0.36
PTCD2-204ENST00000486995 ZNF398Q8TD17 642 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 LRRN4Q8WUT4 740 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
PTCD2-204ENST00000486995 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 PLAC1Q9HBJ0 212 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 FAM49BQ9NUQ9 324 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 SNX9Q9Y5X1 595 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 IKBKGQ9Y6K9 419 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 COL1A2P08123 1366 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 ZSWIM8A7E2V4 1837 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 H3BRB1 525 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 ANP32DO95626 131 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 INHBAP08476 426 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 SDC4P31431 198 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 ADCYAP1R1P41586 468 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 HDAC4P56524 1084 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 OVGP1Q12889 678 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 TAF1BQ53T94 588 aaPredicted RBP12.82□□□□□ -0.36
PTCD2-204ENST00000486995 SPDYAQ5MJ70 313 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 FYB2Q5VWT5 728 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 TLDC1Q6P9B6 456 aa12.82□□□□□ -0.36
PTCD2-204ENST00000486995 RPAINQ86UA6 219 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms