RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 PI4K2AQ9BTU6 479 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 XYLT2Q9H1B5 865 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 TMLHEQ9NVH6 421 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 EBF1Q9UH73 591 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 BAHCC1Q9P281 2608 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 GOLGA6L19H0YKK7 550 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 RHOBTB1O94844 696 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 DDX6P26196 483 aaKnown RBP eCLIP18.7■□□□□ 0.58
MCF2L-226ENST00000486210 PIK3CAP42336 1068 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 TRPC3Q13507 836 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 FBXO43Q4G163 708 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 SPOPLQ6IQ16 392 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 LRRC52Q8N7C0 313 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 HPDLQ96IR7 371 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 NDST4Q9H3R1 872 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 ECT2Q9H8V3 914 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 COQ4Q9Y3A0 265 aa18.7■□□□□ 0.58
MCF2L-226ENST00000486210 HELZP42694 1942 aaKnown RBP18.69■□□□□ 0.58
MCF2L-226ENST00000486210 ANTXRLA6NF34 631 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 LRRC10BA6NIK2 292 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 CDX4O14627 284 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-226ENST00000486210 PMM2O15305 246 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 APBB3O95704 486 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 AMPD2Q01433 879 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 ZNF268Q14587 947 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-226ENST00000486210 PDGFRLQ15198 375 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 SH3PXD2AQ5TCZ1 1133 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 SDHAF4Q5VUM1 108 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 MON1AQ86VX9 555 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 TMEM86AQ8N2M4 240 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 APOBEC3GQ9HC16 384 aaKnown RBP18.69■□□□□ 0.58
MCF2L-226ENST00000486210 RAB20Q9NX57 234 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 INVSQ9Y283 1065 aa18.69■□□□□ 0.58
MCF2L-226ENST00000486210 TNRC6BQ9UPQ9 1833 aaKnown RBP18.69■□□□□ 0.58
MCF2L-226ENST00000486210 SOBPA7XYQ1 873 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 PATE3B3GLJ2 98 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 CSH1P0DML2 217 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 CSH2P0DML3 217 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 DGKEP52429 567 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 RPL10AP62906 217 aaKnown RBP18.68■□□□□ 0.58
MCF2L-226ENST00000486210 TPM4P67936 248 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 MTF1Q14872 753 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 ZNF77Q15935 545 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 PMS2CLQ68D20 193 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 CC2D1AQ6P1N0 951 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-226ENST00000486210 FBXL13Q8NEE6 735 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 LMO3Q8TAP4 145 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 MRPS31Q92665 395 aaKnown RBP18.68■□□□□ 0.58
MCF2L-226ENST00000486210 CD101Q93033 1021 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 NAP1L5Q96NT1 182 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-226ENST00000486210 SLC22A12Q96S37 553 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 CRACR2AQ9BSW2 395 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 ADAM33Q9BZ11 813 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 TPSD1Q9BZJ3 242 aa18.68■□□□□ 0.58
MCF2L-226ENST00000486210 UXTQ9UBK9 157 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-226ENST00000486210 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-226ENST00000486210 PES1O00541 588 aaKnown RBP18.67■□□□□ 0.58
MCF2L-226ENST00000486210 P4HA2O15460 535 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 STAU1O95793 577 aaKnown RBP18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ASS1P00966 412 aaKnown RBP18.67■□□□□ 0.58
MCF2L-226ENST00000486210 PCSK1P29120 753 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ATICP31939 592 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 GBP1P32455 592 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 FANCCQ00597 558 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 MYO1EQ12965 1108 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 USP4Q13107 963 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ZNF699Q32M78 642 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 DAB2IPQ5VWQ8 1189 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 CPA6Q8N4T0 437 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ANKRD20A12PQ8NF67 263 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 SPATA18Q8TC71 538 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 OSCP1Q8WVF1 389 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 GATA6Q92908 595 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 TATDN2Q93075 761 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ACDQ96AP0 544 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ACBD6Q9BR61 282 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 DDX43Q9NXZ2 648 aaKnown RBP18.67■□□□□ 0.58
MCF2L-226ENST00000486210 WNT6Q9Y6F9 365 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 ZZEF1O43149 2961 aa18.67■□□□□ 0.58
MCF2L-226ENST00000486210 SLC9A1P19634 815 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 BCKDHBP21953 392 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 LHX1P48742 406 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 KCNMA1Q12791 1236 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 SGSM1Q2NKQ1 1148 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 EML3Q32P44 896 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 INTS6LQ5JSJ4 861 aaKnown RBP18.66■□□□□ 0.58
MCF2L-226ENST00000486210 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 EHBP1Q8NDI1 1231 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 EXOC4Q96A65 974 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 CYP2S1Q96SQ9 504 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 INTS2Q9H0H0 1204 aaKnown RBP18.66■□□□□ 0.58
MCF2L-226ENST00000486210 VRTNQ9H8Y1 702 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 ABCB6Q9NP58 842 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 DUS2Q9NX74 493 aaKnown RBP18.66■□□□□ 0.58
MCF2L-226ENST00000486210 NXF1Q9UBU9 619 aaKnown RBP18.66■□□□□ 0.58
MCF2L-226ENST00000486210 L1RE1Q9UN81 338 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 SNX9Q9Y5X1 595 aa18.66■□□□□ 0.58
MCF2L-226ENST00000486210 ASCC3Q8N3C0 2202 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms