RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 PKDCCQ504Y2 493 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 RAB41Q5JT25 222 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 C1orf228Q6PIY5 440 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 PIGZQ86VD9 579 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 PPM1KQ8N3J5 372 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 ANKRD52Q8NB46 1076 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 NELL1Q92832 810 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 CYLDQ9NQC7 956 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 NUDT5Q9UKK9 219 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 TSPAN16Q9UKR8 245 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 SPAG17Q6Q759 2223 aa17.55■□□□□ 0.4
CCHCR1-214ENST00000486060 OTOGLQ3ZCN5 2332 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 ANTXRLA6NF34 631 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 O00370 1275 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 MDM4O15151 490 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 LAMTOR5O43504 91 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 GREM1O60565 184 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 TRIM21P19474 475 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 GALK1P51570 392 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 SATB1Q01826 763 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 APBA1Q02410 837 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 CSTF1Q05048 431 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 PDE4CQ08493 712 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 TMEM270Q6UE05 265 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 MAMSTRQ6ZN01 415 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 BHLHA9Q7RTU4 235 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 CCDC186Q7Z3E2 898 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 ADGRG2Q8IZP9 1017 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 CPA6Q8N4T0 437 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 UBA3Q8TBC4 463 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 KLF16Q9BXK1 252 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 TLR8Q9NR97 1041 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 FBXO4Q9UKT5 387 aa17.54■□□□□ 0.4
CCHCR1-214ENST00000486060 EGFP01133 1207 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 CYP17A1P05093 508 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 CD19P15391 556 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 OPRD1P41143 372 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 ZNF132P52740 706 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 GCNT1Q02742 428 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 MESP2Q0VG99 397 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 DGKKQ5KSL6 1271 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 GJB7Q6PEY0 223 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 RBM43Q6ZSC3 357 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 NDRG1Q92597 394 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 CRACR2AQ9BSW2 395 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 UBXN6Q9BZV1 441 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 PCDHB4Q9Y5E5 795 aa17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 PTPRZ1P23471 2315 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-214ENST00000486060 RALGAPA1Q6GYQ0 2036 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 GPR179Q6PRD1 2367 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 E2F8A0AVK6 867 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 PRR23AA6NEV1 266 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 FGFR1OPO95684 399 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 VDRP11473 427 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 RARGP13631 454 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 SLC9A1P19634 815 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 BRD2P25440 801 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 YWHAEP62258 255 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 LRRC32Q14392 662 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 ZNF528Q3MIS6 628 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 RHBDF2Q6PJF5 856 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 KIAA1958Q8N8K9 716 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 RBBP8NLQ8NC74 664 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 POLR3BQ9NW08 1133 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 CNTN6Q9UQ52 1028 aa17.52■□□□□ 0.4
CCHCR1-214ENST00000486060 EP300Q09472 2414 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 XPO1O14980 1071 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 GFRA3O60609 400 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 PAEPP09466 180 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 IRF1P10914 325 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 BCAT1P54687 386 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 DMWDQ09019 674 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 BST2Q10589 180 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 CETN1Q12798 172 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 DHCR24Q15392 516 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 HSP90AA4PQ58FG1 418 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 MIIPQ5JXC2 388 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 DPY19L2P1Q6NXN4 242 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 TRIM65Q6PJ69 517 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 LCLAT1Q6UWP7 414 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 C12orf40Q86WS4 652 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 DDX42Q86XP3 938 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 CREBRFQ8IUR6 639 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 SFTPA1Q8IWL2 248 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 BBS7Q8IWZ6 715 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 SPEM1Q8N4L4 309 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 P2RY13Q9BPV8 354 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 IER2Q9BTL4 223 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 ULBP1Q9BZM6 244 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 DNAI2Q9GZS0 605 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 THAP9Q9H5L6 903 aa17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 AJAP1Q9UKB5 411 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCHCR1-214ENST00000486060 K7ESF4 209 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms