RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ABCG1P45844 678 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 DIO1P49895 249 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 CLCA4Q14CN2 919 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 MANEALQ5VSG8 457 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 RNF152Q8N8N0 203 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 SARGQ9BW04 601 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 PNPLA8Q9NP80 782 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 DNAJB11Q9UBS4 358 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 ZNF212Q9UDV6 495 aa5.91□□□□□ -1.46
CCDC66-219ENST00000484441 A0A087WZ62 844 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 RHPN2P1A8MT19 583 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 EXOC5O00471 708 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 CES2O00748 559 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 USP1O94782 785 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 APEHP13798 732 aaKnown RBP5.9□□□□□ -1.46
CCDC66-219ENST00000484441 MCM5P33992 734 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 HTR7P34969 479 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 PIK3CBP42338 1070 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 CASP5P51878 434 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 COPAP53621 1224 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 ITGA8P53708 1063 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 ZNF543Q08ER8 600 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 KCNAB1Q14722 419 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 CEP78Q5JTW2 689 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 TMEM63BQ5T3F8 832 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 METTL25Q8N6Q8 603 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 PNLDC1Q8NA58 520 aaKnown RBP5.9□□□□□ -1.46
CCDC66-219ENST00000484441 ZNF398Q8TD17 642 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 FAM227BQ96M60 508 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 ZCWPW1Q9H0M4 648 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 SNX15Q9NRS6 342 aa5.9□□□□□ -1.46
CCDC66-219ENST00000484441 COL15A1P39059 1388 aa5.9□□□□□ -1.47
CCDC66-219ENST00000484441 UBE2Q2LH0YL09 131 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 H3BNC9 293 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 KIF3BO15066 747 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 MT-CO3P00414 261 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 PRR35P0CG20 571 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 CYP2A6P11509 494 aaPredicted RBP5.89□□□□□ -1.47
CCDC66-219ENST00000484441 TRIM27P14373 513 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 PHKG2P15735 406 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 TSHRP16473 764 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 STK3Q13188 491 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCDC66-219ENST00000484441 FAM187BQ17R55 369 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 C4orf46Q504U0 113 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 DENND2CQ68D51 928 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 GALNT16Q8N428 558 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 ADAMTS18Q8TE60 1221 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 FYTTD1Q96QD9 318 aaKnown RBP5.89□□□□□ -1.47
CCDC66-219ENST00000484441 COLEC11Q9BWP8 271 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 TFCP2L1Q9NZI6 479 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 LPAR3Q9UBY5 353 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 CORO2BQ9UQ03 480 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 BTBD3Q9Y2F9 522 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 SNX13Q9Y5W8 968 aa5.89□□□□□ -1.47
CCDC66-219ENST00000484441 PQBP1O60828 265 aaKnown RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 CD19P15391 556 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 CREB1P16220 341 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 SFPQP23246 707 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 RBL1P28749 1068 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 ALDH5A1P51649 535 aaPredicted RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 FHL3Q13643 280 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 LARS2Q15031 903 aaKnown RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 ST3GAL2Q16842 350 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 CERKLQ49MI3 558 aaPredicted RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 MORN5Q5VZ52 161 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 ZNF626Q68DY1 528 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 RNF44Q7L0R7 432 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 MBD3L2Q8NHZ7 208 aaPredicted RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 PNISRQ8TF01 805 aaKnown RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 IQCDQ96DY2 449 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 KAZALD1Q96I82 304 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 HIST1H2AAQ96QV6 131 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 NKX1-2Q9UD57 310 aaPredicted RBP5.88□□□□□ -1.47
CCDC66-219ENST00000484441 STEAP1Q9UHE8 339 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 HPSEQ9Y251 543 aa5.88□□□□□ -1.47
CCDC66-219ENST00000484441 A0A1W2PPC4 97 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 AREL1O15033 823 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 THAP12O43422 761 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 KCNQ3O43525 872 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 CYP2D6P10635 497 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 ATF7P17544 494 aaPredicted RBP5.87□□□□□ -1.47
CCDC66-219ENST00000484441 KELP23276 732 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 MPGP29372 298 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 NTSR1P30989 418 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 SRSF7Q16629 238 aaKnown RBP eCLIP5.87□□□□□ -1.47
CCDC66-219ENST00000484441 MTX3Q5HYI7 312 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 SERPINA13PQ6UXR4 307 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 ZNF813Q6ZN06 617 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 YTHDF3Q7Z739 585 aaKnown RBP5.87□□□□□ -1.47
CCDC66-219ENST00000484441 ATP11CQ8NB49 1132 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 EDC3Q96F86 508 aaKnown RBP5.87□□□□□ -1.47
CCDC66-219ENST00000484441 C5orf34Q96MH7 638 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 ZNF778Q96MU6 729 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 QTRT1Q9BXR0 403 aaKnown RBP5.87□□□□□ -1.47
CCDC66-219ENST00000484441 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
CCDC66-219ENST00000484441 SLC27A6Q9Y2P4 619 aa5.87□□□□□ -1.47
CCDC66-219ENST00000484441 CYP2D7A0A087X1C5 515 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 BCAR3O75815 825 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms