RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 TRDMT1O14717 391 aaKnown RBP20.49■□□□□ 0.87
LIMS2-215ENST00000484252 KLF11O14901 512 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 HAUS5O94927 633 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 C22orf31O95567 290 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 LMNAP02545 664 aaKnown RBP20.49■□□□□ 0.87
LIMS2-215ENST00000484252 GSTA2P09210 222 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 GNAZP19086 355 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 MAGEA6P43360 314 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 ARFIP2P53365 341 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 ZNF484Q5JVG2 852 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 LGSNQ5TDP6 509 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 FAM183BPQ6ZVS7 135 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 PLD5Q8N7P1 536 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 RAB6BQ9NRW1 208 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 PPP1R1BQ9UD71 204 aaPredicted RBP20.49■□□□□ 0.87
LIMS2-215ENST00000484252 CSADQ9Y600 493 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 BCLAF3A2AJT9 711 aaKnown RBP20.49■□□□□ 0.87
LIMS2-215ENST00000484252 APOL1O14791 398 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 IRF6O14896 467 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 CCDC22O60826 627 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 IQCF3P0C7M6 154 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 DESP17661 470 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 EPHB2P29323 1055 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 GRIK3Q13003 919 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 MTM1Q13496 603 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 TMEM132DQ14C87 1099 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 TRIM42Q8IWZ5 723 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 ARMC2Q8NEN0 867 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 PTPRN2Q92932 1015 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 LRRC39Q96DD0 335 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 TBCBQ99426 244 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 KLC2Q9H0B6 622 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 IFT122Q9HBG6 1241 aa20.49■□□□□ 0.87
LIMS2-215ENST00000484252 MGAMO43451 1857 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 CNMDO75829 334 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 KRT37O76014 449 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 PYGBP11216 843 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 NEFHP12036 1026 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 NDST1P52848 882 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 YWHAZP63104 245 aaKnown RBP20.48■□□□□ 0.87
LIMS2-215ENST00000484252 RBP5P82980 135 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 OVGP1Q12889 678 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 AMHR2Q16671 573 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 SH3PXD2AQ5TCZ1 1133 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 MAP1SQ66K74 1059 aaPredicted RBP20.48■□□□□ 0.87
LIMS2-215ENST00000484252 TRNP1Q6NT89 227 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 C1orf228Q6PIY5 440 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 NT5DC4Q86YG4 428 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 AFG1LQ8WV93 481 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 FAM111AQ96PZ2 611 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 PDZD7Q9H5P4 517 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
LIMS2-215ENST00000484252 ERAP1Q9NZ08 941 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 CNTN3Q9P232 1028 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 HEY2Q9UBP5 337 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 TTLL3Q9Y4R7 772 aa20.48■□□□□ 0.87
LIMS2-215ENST00000484252 A0A0G2JND7 137 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 ZNF487B1APH4 448 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 E5RJQ4 531 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 KCNN4O15554 427 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 LUC7L3O95232 432 aaKnown RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 SNRPAP09012 282 aaKnown RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 NRLP54845 237 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 CDK16Q00536 496 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 C15orf59Q2T9L4 293 aaPredicted RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 SLC10A6Q3KNW5 377 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 LRRC6Q86X45 466 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 NT5C1AQ9BXI3 368 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 IQCGQ9H095 443 aaKnown RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 C12orf65Q9H3J6 166 aaKnown RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 TSPAN16Q9UKR8 245 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 C2CD2Q9Y426 696 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 DNAJC25-GNG10A0A024R161 153 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 COPEO14579 308 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 ZBED1O96006 694 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 PGK2P07205 417 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 OSBPP22059 807 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 PRKCHP24723 683 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 SERPINB4P48594 390 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 BCAR1P56945 870 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 KRT72Q14CN4 511 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 SLC9A4Q6AI14 798 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 MCUQ8NE86 351 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 TTC17Q96AE7 1141 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 SKA1Q96BD8 255 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 CFAP36Q96G28 342 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 NSL1Q96IY1 281 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 NUDCD1Q96RS6 583 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 MKS1Q9NXB0 559 aa20.47■□□□□ 0.87
LIMS2-215ENST00000484252 NKX1-2Q9UD57 310 aaPredicted RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 ZC3H7BQ9UGR2 993 aaKnown RBP20.47■□□□□ 0.87
LIMS2-215ENST00000484252 A0A0G2JLL6 359 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-215ENST00000484252 C1QAP02745 245 aa20.46■□□□□ 0.87
LIMS2-215ENST00000484252 TPBGLP0DKB5 382 aa20.46■□□□□ 0.87
LIMS2-215ENST00000484252 TXNP10599 105 aaKnown RBP20.46■□□□□ 0.87
LIMS2-215ENST00000484252 CYP3A5P20815 502 aa20.46■□□□□ 0.87
LIMS2-215ENST00000484252 CCDC14Q49A88 953 aa20.46■□□□□ 0.87
LIMS2-215ENST00000484252 DPH6Q7L8W6 267 aa20.46■□□□□ 0.87
LIMS2-215ENST00000484252 PRRT2Q7Z6L0 340 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-215ENST00000484252 FBXO16Q8IX29 292 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms