RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 MDH1BQ5I0G3 518 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 ARL6IP4Q66PJ3 421 aaKnown RBP11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 MCTP1Q6DN14 999 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 CHPFQ8IZ52 775 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 BAHD1Q8TBE0 780 aaPredicted RBP11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 MYCBPAPQ8TBZ2 947 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 CALML4Q96GE6 196 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 MRGPRX1Q96LB2 322 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 C8orf48Q96LL4 319 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 STRA6Q9BX79 667 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 TRIM9Q9C026 710 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 KIAA1522Q9P206 1035 aaPredicted RBP11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 SUSD2Q9UGT4 822 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 STARD13Q9Y3M8 1113 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 ZNF462Q96JM2 2506 aa11.58□□□□□ -0.56
SMARCC1-205ENST00000483847 FAM149AA5PLN7 773 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 PRRT4C9JH25 899 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 TRIM66O15016 1216 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 NDUFS2O75306 463 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 GNSP15586 552 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 UBA7P41226 1012 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 PPP3CCP48454 512 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 SYCP2LQ5T4T6 812 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 DPH6Q7L8W6 267 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 DYMQ7RTS9 669 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 DDX42Q86XP3 938 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 OR5B17Q8NGF7 314 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 NOC3LQ8WTT2 800 aaKnown RBP11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 HPDLQ96IR7 371 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 AK8Q96MA6 479 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 SLITRK1Q96PX8 696 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 GABRG3Q99928 467 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 MRPL45Q9BRJ2 306 aaKnown RBP11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 ZNF518BQ9C0D4 1074 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 PRDM16Q9HAZ2 1276 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 SPHK2Q9NRA0 654 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 EHD2Q9NZN4 543 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 TBC1D7Q9P0N9 293 aa11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 FNDC3AQ9Y2H6 1198 aaKnown RBP11.57□□□□□ -0.56
SMARCC1-205ENST00000483847 SHROOM3Q8TF72 1996 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 A0A087WV48 116 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 GOLGA8CPA6NN73 597 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 CYSRT1A8MQ03 144 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 WASH3PC4AMC7 463 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 SLC26A4O43511 780 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 DKK1O94907 266 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 TMEM191BP0C7N4 346 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 IRF1P10914 325 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 WARSP23381 471 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 CASP5P51878 434 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 MAPRE1Q15691 268 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 WDR45BQ5MNZ6 344 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 TDRD10Q5VZ19 366 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 GRAMD4Q6IC98 578 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 KIAA1324Q6UXG2 1013 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 HS2ST1Q7LGA3 356 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 DNASE2BQ8WZ79 361 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 LARP4BQ92615 738 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 HVCN1Q96D96 273 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 OTUB2Q96DC9 234 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 TOE1Q96GM8 510 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 ZDHHC5Q9C0B5 715 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 DPEP3Q9H4B8 488 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 PCIF1Q9H4Z3 704 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 GAREM1Q9H706 876 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 CCSER2Q9H7U1 834 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 TM7SF3Q9NS93 570 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 DNAJC17Q9NVM6 304 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 INTS13Q9NVM9 706 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 CHORDC1Q9UHD1 332 aaPredicted RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 BTBD3Q9Y2F9 522 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 SH3BP1Q9Y3L3 701 aa11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
SMARCC1-205ENST00000483847 A0A1B0GTW7 788 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 MEI4A8MW99 385 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 KCNJ18B7U540 433 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 CLDN5O00501 218 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 CILPO75339 1184 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 CD6P30203 668 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 C19orf57Q0VDD7 668 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 MYO1EQ12965 1108 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 L1TD1Q5T7N2 865 aaKnown RBP11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 SDE2Q6IQ49 451 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 RASSF8Q8NHQ8 419 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 SCAMP5Q8TAC9 235 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 FOXJ1Q92949 421 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 UBL7Q96S82 380 aaPredicted RBP11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 MMS19Q96T76 1030 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 GPR174Q9BXC1 333 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 FGFBP2Q9BYJ0 223 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms