RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 OR1D2P34982 312 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 GJC1P36383 396 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 GRIK1P39086 918 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 MATKP42679 507 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 GLUD2P49448 558 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 PGFP49763 221 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 ATXN1P54253 815 aaKnown RBP10.57□□□□□ -0.72
HDAC6-226ENST00000483656 HDAC4P56524 1084 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 YWHAZP63104 245 aaKnown RBP10.57□□□□□ -0.72
HDAC6-226ENST00000483656 ATP11AP98196 1134 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 ROR1Q01973 937 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SIX1Q15475 284 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-226ENST00000483656 TEX35Q5T0J7 233 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SYPL2Q5VXT5 272 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 MFSD7Q6UXD7 560 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SLC13A5Q86YT5 568 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SCN4BQ8IWT1 228 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 STKLD1Q8NE28 680 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 EXD1Q8NHP7 514 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 FAM172AQ8WUF8 416 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 IRGQQ8WZA9 623 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 RAPGEF5Q92565 580 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 GOLGA1Q92805 767 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 NT5C3BQ969T7 300 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 TMEM169Q96HH4 297 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 RPGRIP1Q96KN7 1286 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 SLC9A7Q96T83 725 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 TBCBQ99426 244 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 NPY6RQ99463 290 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 RAD9AQ99638 391 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 AP1M1Q9BXS5 423 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 KLHL11Q9NVR0 708 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 IL37Q9NZH6 218 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 PCSK1NQ9UHG2 260 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 NAALADL1Q9UQQ1 740 aa10.57□□□□□ -0.72
HDAC6-226ENST00000483656 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 C2CD2LO14523 706 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 RNF8O76064 485 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 FGF18O76093 207 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ABLIM3O94929 683 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SEC24AO95486 1093 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 LTFP02788 710 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 RARAP10276 462 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ATP2A2P16615 1042 aaKnown RBP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 NOS2P35228 1153 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ARSEP51690 589 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SLC5A3P53794 718 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 USP46P62068 366 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SMARCB1Q12824 385 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 DUSP4Q13115 394 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 LLGL1Q15334 1064 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ELF2Q15723 593 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 TAZQ16635 292 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 CDO1Q16878 200 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 LONRF2Q1L5Z9 754 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 C9orf50Q5SZB4 431 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SEL1L2Q5TEA6 688 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 POLNQ7Z5Q5 900 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ADAT2Q7Z6V5 191 aaKnown RBP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SCD5Q86SK9 330 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 RCOR2Q8IZ40 523 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 VPS52Q8N1B4 723 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 CMASQ8NFW8 434 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SPPL2BQ8TCT7 592 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 C2orf15Q8WU43 125 aaKnown RBP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 AUTS2Q8WXX7 1259 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 UBXN4Q92575 508 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 DPF3Q92784 378 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 RNF25Q96BH1 459 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 FAM149B1Q96BN6 582 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SLITRK1Q96PX8 696 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ZBED2Q9BTP6 218 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ANKZF1Q9H8Y5 726 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 ZWILCHQ9H900 591 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 POPDC2Q9HBU9 364 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 NGRNQ9NPE2 291 aaKnown RBP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 USP18Q9UMW8 372 aa10.56□□□□□ -0.72
HDAC6-226ENST00000483656 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDAC6-226ENST00000483656 FAM92AA1XBS5 289 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 KRIT1O00522 736 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 TRIM66O15016 1216 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SART1O43290 800 aaKnown RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 ZRANB2O95218 330 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 KRT1P04264 644 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 KRT7P08729 469 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 CD48P09326 243 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 PPM1AP35813 382 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SULT1E1P49888 294 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 MRPS25P82663 173 aaKnown RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 ADCY2Q08462 1091 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 KLF1Q13351 362 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 RAB33AQ14088 237 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 CA9Q16790 459 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 HADHQ16836 314 aaKnown RBP10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SMTNL2Q2TAL5 461 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 SLC25A52Q3SY17 297 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 DCAF6Q58WW2 860 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 KCNT1Q5JUK3 1230 aa10.55□□□□□ -0.72
HDAC6-226ENST00000483656 BSPRYQ5W0U4 402 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms