RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 NR1I3Q14994 352 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 C1orf228Q6PIY5 440 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 BHLHA9Q7RTU4 235 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 SCD5Q86SK9 330 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 ZNF677Q86XU0 584 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 FMNL3Q8IVF7 1028 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
COL2A1-206ENST00000483376 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 FAM83CQ9BQN1 747 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 SLC4A5Q9BY07 1137 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 TSPY26PQ9H489 355 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 BRD9Q9H8M2 597 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 MYO6Q9UM54 1294 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 TEX33O43247 280 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
COL2A1-206ENST00000483376 GABBR2O75899 941 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 CYP11B1P15538 503 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 GDI1P31150 447 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 CDH5P33151 784 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-206ENST00000483376 PGFP49763 221 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 STARD6P59095 220 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
COL2A1-206ENST00000483376 ADIGQ0VDE8 80 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 GRM2Q14416 872 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 MTF1Q14872 753 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 TMEM110Q86TL2 294 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 SLC47A2Q86VL8 602 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 SIX6OS1Q8N1H7 587 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 ST13P5Q8NFI4 369 aaPredicted RBP17.1■□□□□ 0.33
COL2A1-206ENST00000483376 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 SHDQ96IW2 340 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 DDX23Q9BUQ8 820 aaKnown RBP17.1■□□□□ 0.33
COL2A1-206ENST00000483376 ULBP1Q9BZM6 244 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 SMG9Q9H0W8 520 aaKnown RBP17.1■□□□□ 0.33
COL2A1-206ENST00000483376 ACP6Q9NPH0 428 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 OSER1Q9NX31 292 aa17.1■□□□□ 0.33
COL2A1-206ENST00000483376 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 KRBA1A5PL33 1030 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 ABL1P00519 1130 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 SERPINC1P01008 464 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 CALCAP01258 141 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 CFHP08603 1231 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 RALAP11233 206 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 SOX5P35711 763 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 ATP5C1P36542 298 aaKnown RBP17.09■□□□□ 0.33
COL2A1-206ENST00000483376 STAT1P42224 750 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 DAOAP59103 153 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 ZXDBP98169 803 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 FANCCQ00597 558 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 FIGNQ5HY92 759 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 DENND1BQ6P3S1 775 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 BEND5Q7L4P6 421 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 EPS8L1Q8TE68 723 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 SH3RF2Q8TEC5 729 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
COL2A1-206ENST00000483376 NAP1L5Q96NT1 182 aaPredicted RBP17.09■□□□□ 0.33
COL2A1-206ENST00000483376 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 CCSER2Q9H7U1 834 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 NAGPAQ9UK23 515 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 FBXL21Q9UKT6 434 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 CPQQ9Y646 472 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 COL4A2P08572 1712 aa17.09■□□□□ 0.33
COL2A1-206ENST00000483376 E2F8A0AVK6 867 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 LEFTY2O00292 366 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 LSM8O95777 96 aaKnown RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 PNMA6AP0CW24 399 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 MBL2P11226 248 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 RARGP13631 454 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 KRT9P35527 623 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 YWHAGP61981 247 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 PDCLQ13371 301 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 MLF2Q15773 248 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 SLC44A4Q53GD3 710 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 SIX5Q8N196 739 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 WDTC1Q8N5D0 677 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 OSCP1Q8WVF1 389 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 C8orf33Q9H7E9 229 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 OLA1Q9NTK5 396 aaKnown RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 DNMT3LQ9UJW3 386 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 CEP83Q9Y592 693 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 ZDBF2Q9HCK1 2354 aa17.08■□□□□ 0.32
COL2A1-206ENST00000483376 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.32
COL2A1-206ENST00000483376 F5P12259 2224 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 SLC9A3R1O14745 358 aaPredicted RBP17.07■□□□□ 0.32
COL2A1-206ENST00000483376 PBX1P40424 430 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 CLCN5P51795 746 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 SNX16P57768 344 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
COL2A1-206ENST00000483376 HFE2Q6ZVN8 426 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 FBXL6Q8N531 539 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
COL2A1-206ENST00000483376 NOX5Q96PH1 765 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms