RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 IL10RAQ13651 578 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 DLGAP5Q15398 846 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SLC35G1Q2M3R5 365 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SPATS1Q496A3 300 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 AMOTQ4VCS5 1084 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 MEX3CQ5U5Q3 659 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 SLFN13Q68D06 897 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CHD1LQ86WJ1 897 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 RNF168Q8IYW5 571 aaPredicted RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 DCLK2Q8N568 766 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 KCTD6Q8NC69 237 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 OR5M3Q8NGP4 307 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 DENND1AQ8TEH3 1009 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 KRT35Q92764 455 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 NSUN4Q96CB9 384 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 CABS1Q96KC9 395 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 FAM81BQ96LP2 452 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 DACH2Q96NX9 599 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 EYA3Q99504 573 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 TCF25Q9BQ70 676 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SLC39A3Q9BRY0 314 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SENP6Q9GZR1 1112 aaPredicted RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 DNAI2Q9GZS0 605 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 PAIP1Q9H074 479 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 C12orf65Q9H3J6 166 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 RABEP2Q9H5N1 569 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 TMEM140Q9NV12 185 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 COQ3Q9NZJ6 369 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CALCOCO1Q9P1Z2 691 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 HPCAL4Q9UM19 191 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CNPY2Q9Y2B0 182 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 PCDHB1Q9Y5F3 818 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 PCDHA13Q9Y5I0 950 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SNX13Q9Y5W8 968 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 A0A1W2PPL8 197 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 A0A1W2PRX2 142 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 AQP12BA6NM10 295 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 K7EPI3 171 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 CASQ2O14958 399 aaPredicted RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 ADCY6O43306 1168 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 CDC14BO60729 498 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 SMPD2O60906 423 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 RTN2O75298 545 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 GPR32O75388 356 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 USP1O94782 785 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 CSPG5O95196 566 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MYF5P13349 255 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 EEF2P13639 858 aaKnown RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 SERPINF1P36955 418 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 CASRP41180 1078 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 SKIV2L2P42285 1042 aaKnown RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 DPP6P42658 865 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MAPK7Q13164 816 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MRPL49Q13405 166 aaKnown RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 EIF4A2Q14240 407 aaKnown RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 RAB39AQ14964 217 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 CAVIN4Q5BKX8 364 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 SNX30Q5VWJ9 437 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 DCLRE1AQ6PJP8 1040 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 LPCAT2Q7L5N7 544 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 CCDC186Q7Z3E2 898 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 ZNF572Q7Z3I7 529 aaPredicted RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 PIWIL3Q7Z3Z3 882 aaKnown RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 RSPH3Q86UC2 560 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 ZFPM1Q8IX07 1006 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 GPR135Q8IZ08 494 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 TCP11L2Q8N4U5 519 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 PLBD2Q8NHP8 589 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 KCNG4Q8TDN1 519 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 ADAMTS15Q8TE58 950 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 SH3RF3Q8TEJ3 882 aaPredicted RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 KAT5Q92993 513 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 PTP4A1Q93096 173 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 LTV1Q96GA3 475 aaPredicted RBP4.47□□□□□ -1.69
VPS41-212ENST00000482217 CLPTM1LQ96KA5 538 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MRGPRX4Q96LA9 322 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 RUNDC3BQ96NL0 473 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 DPYSL5Q9BPU6 564 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 PDCD2LQ9BRP1 358 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 TCHPQ9BT92 498 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 TTPALQ9BTX7 342 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MEGF9Q9H1U4 602 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 PDE7BQ9NP56 450 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MOCS1Q9NZB8 636 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 NCDNQ9UBB6 729 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 ARHGAP26Q9UNA1 814 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 DUSP10Q9Y6W6 482 aa4.47□□□□□ -1.69
VPS41-212ENST00000482217 MYBBP1AQ9BQG0 1328 aaKnown RBP4.46□□□□□ -1.69
VPS41-212ENST00000482217 ZCCHC6Q5VYS8 1495 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 GPR75-ASB3A0A0A6YYF3 556 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 UBE2QL1A1L167 161 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 RGSL1A5PLK6 1076 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 ZSCAN5CA6NGD5 496 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 CAPN8A6NHC0 703 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 A8MVJ9 347 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 LACTBL1A8MY62 500 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 M0QX08 132 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms